Adi_g020303 (FTSH12, EMB36, EMB156, EMB1047)

Aliases : FTSH12, EMB36, EMB156, EMB1047

Description : component *(FtsH12) of protein translocation ATPase motor complex & original description: none

Gene families : OG0008369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008369_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Adi_g020303

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00062p00195710	FTSH12, EMB36,...	Protein degradation.peptidase families.metallopeptidase...	0.06	OrthoFinder output from all 47 species
Ala_g02662	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
Azfi_s0059.g034668	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.03	OrthoFinder output from all 47 species
Cba_g02105	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
Ceric.1Z112600.1	FTSH12, EMB36,...	not classified & original description: pacid=50567678...	0.03	OrthoFinder output from all 47 species
Ceric.35G066800.1	FTSH12, EMB36,...	not classified & original description: pacid=50581576...	0.03	OrthoFinder output from all 47 species
Dac_g10591	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
GSVIVT01036763001	FTSH12, EMB36,...	Protein degradation.peptidase families.metallopeptidase...	0.05	OrthoFinder output from all 47 species
Gb_37729	FTSH12, EMB36,...	ATP-dependent zinc metalloprotease FTSH 12,...	0.02	OrthoFinder output from all 47 species
Len_g15368	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.02	OrthoFinder output from all 47 species
Lfl_g04997	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.05	OrthoFinder output from all 47 species
MA_10426764g0010	FTSH12, EMB36,...	ATP-dependent zinc metalloprotease FTSH 12,...	0.04	OrthoFinder output from all 47 species
Mp3g06130.1	FTSH12, EMB36,...	component FtsH12 of protein translocation ATPase motor complex	0.05	OrthoFinder output from all 47 species
Msp_g15283	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.03	OrthoFinder output from all 47 species
Ore_g17622	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.03	OrthoFinder output from all 47 species
Ppi_g13347	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018984	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.03	OrthoFinder output from all 47 species
Sam_g16344	No alias	component *(FtsH12) of protein translocation ATPase...	0.03	OrthoFinder output from all 47 species
Smo81522	FTSH12, EMB36,...	Protein degradation.peptidase families.metallopeptidase...	0.04	OrthoFinder output from all 47 species
Solyc02g079000.4.1	FTSH12, EMB36,...	component FtsH12 of protein translocation ATPase motor complex	0.07	OrthoFinder output from all 47 species
Spa_g15771	FTSH12, EMB36,...	component *(FtsH12) of protein translocation ATPase...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	Interproscan
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	568	705
IPR041569	AAA_lid_3	728	771
IPR000642	Peptidase_M41	802	1000

External Links

No external refs found!

Adi_g020303 (FTSH12, EMB36, EMB156, EMB1047)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation