Aliases : FUS1, EMB168, DET340, ATCOP1, COP1
Description : component *(COP1) of COP1-SPA light signal transduction ubiquitin E3 ligase complex & original description: none
Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G53090 | SPA4 | SPA1-related 4 | 0.02 | OrthoFinder output from all 47 species | |
AT3G15354 | SPA3 | SPA1-related 3 | 0.03 | OrthoFinder output from all 47 species | |
Ala_g09701 | SPA4 | regulatory component *(SPA) of COP1-SPA light signal... | 0.07 | OrthoFinder output from all 47 species | |
Als_g24085 | SPA3 | regulatory component *(SPA) of COP1-SPA light signal... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g02304 | FUS1, EMB168,... | component *(COP1) of COP1-SPA light signal transduction... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g05358 | SPA4 | regulatory component *(SPA) of COP1-SPA light signal... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g15102 | FUS1, EMB168,... | component *(COP1) of COP1-SPA light signal transduction... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.22G021600.1 | FUS1, EMB168,... | component *(COP1) of COP1-SPA light signal transduction... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g20526 | SPA4 | regulatory component *(SPA) of COP1-SPA light signal... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g23991 | SPA4 | EC_2.7 transferase transferring phosphorus-containing... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027054001 | SPA1 | External stimuli response.light.red/far red... | 0.02 | OrthoFinder output from all 47 species | |
Len_g13907 | SPA4 | regulatory component *(SPA) of COP1-SPA light signal... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g04186 | FUS1, EMB168,... | component *(COP1) of COP1-SPA light signal transduction... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g12926 | SPA4 | regulatory component *(SPA) of COP1-SPA light signal... | 0.02 | OrthoFinder output from all 47 species | |
MA_423393g0010 | SPA3 | protein kinase (PEK). regulator component SPA of... | 0.04 | OrthoFinder output from all 47 species | |
Mp3g25460.1 | SPA3 | protein kinase (PEK). regulator component SPA of... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g11726 | FUS1, EMB168,... | component *(COP1) of COP1-SPA light signal transduction... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g26130 | SPA3 | regulatory component *(SPA) of COP1-SPA light signal... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g05451 | FUS1, EMB168,... | component *(COP1) of COP1-SPA light signal transduction... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g07004 | SPA4 | regulatory component *(SPA) of COP1-SPA light signal... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g08955 | No alias | component *(COP1) of COP1-SPA light signal transduction... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g39705 | No alias | component *(COP1) of COP1-SPA light signal transduction... | 0.03 | OrthoFinder output from all 47 species | |
Smo141846 | FUS1, EMB168,... | External stimuli response.light.red/far red... | 0.02 | OrthoFinder output from all 47 species | |
Smo98534 | SPA4 | External stimuli response.light.red/far red... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g55052 | SPA4 | regulatory component *(Spa) of COP1-Spa light signal... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g20105 | SPA4 | regulatory component *(SPA) of COP1-SPA light signal... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008987 | quinolinate synthetase A activity | IEP | HCCA |
BP | GO:0009435 | NAD biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | HCCA |
BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0019674 | NAD metabolic process | IEP | HCCA |
MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |