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  5. Sacu_v1.1_s0193.g025398

Sacu_v1.1_s0193.g025398


Description : deubiquitinase *(OTU6-12) & original description: CDS=147-893


Gene families : OG0001215 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0193.g025398

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00250460 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Adi_g052544 No alias deubiquitinase *(OTU6-12) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g01682 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59485 No alias deubiquitinase *(OTU6-12) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013725_P001 Zm00001e013725 C85 Otubain cysteine protease 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 167 237
No external refs found!