Aliases : ATSIG5, SIG5, SIGE
Description : basal Sigma-type transcription factor & original description: CDS=542-2422
Gene families : OG0006267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006267_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00015p00253000 | ATSIG5, SIG5,... | RNA polymerase sigma factor sigE,... | 0.02 | OrthoFinder output from all 47 species | |
AT5G24120 | ATSIG5, SIG5, SIGE | sigma factor E | 0.03 | OrthoFinder output from all 47 species | |
Aob_g18205 | ATSIG5, SIG5, SIGE | basal Sigma-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g23756 | ATSIG5, SIG5, SIGE | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g50930.1 | ATSIG5, SIG5,... | basal transcription factor (Sigma) | 0.04 | OrthoFinder output from all 47 species | |
MA_10428665g0010 | ATSIG5, SIG5, SIGE | RNA polymerase sigma factor sigE,... | 0.02 | OrthoFinder output from all 47 species | |
Mp3g02240.1 | ATSIG5, SIG5, SIGE | basal transcription factor (Sigma) | 0.03 | OrthoFinder output from all 47 species | |
Smo147096 | ATSIG5, SIG5, SIGE | RNA biosynthesis.organelle... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g22251 | ATSIG5, SIG5, SIGE | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g20273 | ATSIG5, SIG5, SIGE | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032596_P002 | ATSIG5, SIG5,... | basal transcription factor (Sigma) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006352 | DNA-templated transcription initiation | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
No external refs found! |