Sacu_v1.1_s0006.g002983 (ATGDI1, AT-GDI1, GDI1)

Aliases : ATGDI1, AT-GDI1, GDI1

Description : RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) & original description: CDS=1-1335

Gene families : OG0002116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002116_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0006.g002983

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00066p00096020	GDI2, ATGDI2,...	Vesicle trafficking.regulation of membrane tethering and...	0.03	OrthoFinder output from all 47 species
Aob_g07229	GDI2, ATGDI2	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene03929.t1	GDI2, ATGDI2,...	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Cba_g12736	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Cba_g12737	No alias	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.02	OrthoFinder output from all 47 species
Cba_g77977	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Ceric.05G086400.1	Ceric.05G086400	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Ceric.12G005600.1	ATGDI1, AT-GDI1,...	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.04	OrthoFinder output from all 47 species
Cre09.g388467	No alias	Vesicle trafficking.regulation of membrane tethering and...	0.02	OrthoFinder output from all 47 species
Dcu_g06290	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Gb_32105	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.03	OrthoFinder output from all 47 species
Len_g09591	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Mp6g05010.1	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.04	OrthoFinder output from all 47 species
Nbi_g21880	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.04	OrthoFinder output from all 47 species
Pir_g02243	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Smo271917	ATGDI1, AT-GDI1, GDI1	Vesicle trafficking.regulation of membrane tethering and...	0.04	OrthoFinder output from all 47 species
Solyc08g015860.3.1	GDI2, ATGDI2,...	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.04	OrthoFinder output from all 47 species
Tin_g12403	ATGDI1, AT-GDI1, GDI1	RAB-GTPase GDP-dissociation inhibitor *(RAB-GDI) &...	0.03	OrthoFinder output from all 47 species
Zm00001e027047_P001	GDI2, ATGDI2,...	RAB-GTPase GDP-dissociation inhibitor (RAB-GDI)	0.03	OrthoFinder output from all 47 species
Zm00001e027048_P001	GDI2, ATGDI2,...	accessory subunit of RAB-GTPase...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005092	GDP-dissociation inhibitor activity	IEA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007264	small GTPase mediated signal transduction	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	HCCA
CC	GO:0000124	SAGA complex	IEP	HCCA
CC	GO:0000139	Golgi membrane	IEP	HCCA
CC	GO:0000145	exocyst	IEP	HCCA
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003713	transcription coactivator activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0003997	acyl-CoA oxidase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006406	mRNA export from nucleus	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
CC	GO:0031248	protein acetyltransferase complex	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0051028	mRNA transport	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
CC	GO:0070461	SAGA-type complex	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
CC	GO:1902493	acetyltransferase complex	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018203	GDP_dissociation_inhibitor	1	433

External Links

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Sacu_v1.1_s0006.g002983 (ATGDI1, AT-GDI1, GDI1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation