Azfi_s0250.g060200


Description : component *(CAP-D2A) of condensin I complex & original description: CDS=101-4417


Gene families : OG0004821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004821_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0250.g060200
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT3G57060 No alias binding 0.04 OrthoFinder output from all 47 species
Ala_g26011 No alias component *(CAP-D2A) of condensin I complex & original... 0.02 OrthoFinder output from all 47 species
Als_g16422 No alias component *(CAP-D2A) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Aop_g66013 No alias component *(CAP-D2A) of condensin I complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G005100.1 Ceric.08G005100 component *(CAP-D2A) of condensin I complex & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021070.118 No alias Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021070.119 No alias Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Cre10.g432500 No alias Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Dcu_g06519 No alias component *(CAP-D2A) of condensin I complex & original... 0.05 OrthoFinder output from all 47 species
Gb_21478 No alias component CAP-D2A of condensin I complex 0.02 OrthoFinder output from all 47 species
LOC_Os07g46540.1 LOC_Os07g46540 component CAP-D2A of condensin I complex 0.03 OrthoFinder output from all 47 species
MA_10427588g0010 No alias component CAP-D2A of condensin I complex 0.03 OrthoFinder output from all 47 species
MA_10427588g0020 No alias component CAP-D2A of condensin I complex. serine carboxypeptidase 0.03 OrthoFinder output from all 47 species
Mp3g03650.1 No alias component CAP-D2A of condensin I complex 0.03 OrthoFinder output from all 47 species
Msp_g14231 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Ore_g35549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g41134 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Spa_g43429 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g11231 No alias component *(CAP-D2A) of condensin I complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e035766_P001 Zm00001e035766 component CAP-D2A of condensin I complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR032682 Cnd1_C 994 1155
IPR024324 Condensin_cplx_su1_N 88 255
No external refs found!