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  5. Azfi_s0141.g051344

Azfi_s0141.g051344


Description : not classified & original description: CDS=389-2455


Gene families : OG0006565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0141.g051344

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00130820 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g019161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17473 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61228.t1 Aspi01Gene61228 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G127300.1 Ceric.01G127300 not classified & original description: pacid=50590744... 0.03 OrthoFinder output from all 47 species
Dac_g01712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18015 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g02030.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0201.g025610 No alias not classified & original description: CDS=95-1936 0.03 OrthoFinder output from all 47 species
Sam_g10638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002845_P002 Zm00001e002845 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070402 NADPH binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!