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  5. Azfi_s0046.g030238

Azfi_s0046.g030238


Description : EC_6.1 ligase forming carbon-oxygen bond & original description: CDS=104-1258


Gene families : OG0004197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0046.g030238

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001371.16 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Cre03.g145727 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
LOC_Os08g23110.1 LOC_Os08g23110 tyrosine-tRNA ligase 0.05 OrthoFinder output from all 47 species
Mp2g12140.1 No alias tyrosine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Nbi_g19284 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Solyc01g109360.3.1 Solyc01g109360 tyrosine-tRNA ligase 0.04 OrthoFinder output from all 47 species
Zm00001e040262_P002 Zm00001e040262 tyrosine-tRNA ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004376 glycolipid mannosyltransferase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 60 358
No external refs found!