Aliases : LUG, RON2, Ceric.35G054400
Description : component *(LUG/LUH) of transcriptional co-repressor complex & original description: pacid=50581220 polypeptide=Ceric.35G054400.1.p locus=Ceric.35G054400 ID=Ceric.35G054400.1.v2.1 annot-version=v2.1
Gene families : OG0000790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000790_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00122p00094620 | LUG, RON2,... | RNA biosynthesis.transcriptional repression.LUG... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g011009 | LUG, RON2 | component *(LUG/LUH) of transcriptional co-repressor... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g22303 | LUG, RON2 | component *(LUG/LUH) of transcriptional co-repressor... | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000241.110 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g39318 | LUG, RON2 | component *(LUG/LUH) of transcriptional co-repressor... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g07081 | LUG, RON2 | component *(LUG/LUH) of transcriptional co-repressor... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g08626 | LUG, RON2 | component *(LUG/LUH) of transcriptional co-repressor... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01035791001 | LUG, RON2 | RNA biosynthesis.transcriptional repression.LUG... | 0.04 | OrthoFinder output from all 47 species | |
Gb_02946 | LUG, RON2 | transcriptional co-repressor (LUG) | 0.03 | OrthoFinder output from all 47 species | |
Gb_10347 | LUG, RON2 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g08190.1 | LUG, RON2, LOC_Os01g08190 | transcriptional co-repressor (LUG) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g42260.1 | LUG, RON2, LOC_Os01g42260 | transcriptional co-repressor (LUG) | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os03g64300.1 | LUH, LOC_Os03g64300 | transcriptional co-repressor (LUG) | 0.03 | OrthoFinder output from all 47 species | |
MA_57453g0010 | LUH | transcriptional co-repressor (LUG) | 0.03 | OrthoFinder output from all 47 species | |
MA_65863g0010 | LUH | transcriptional co-repressor (LUG) | 0.03 | OrthoFinder output from all 47 species | |
Ore_g06587 | LUG, RON2 | component *(LUG/LUH) of transcriptional co-repressor... | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g06991 | LUG, RON2 | component *(LUG/LUH) of transcriptional co-repressor... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g11604 | No alias | component *(LUG/LUH) of transcriptional co-repressor... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g13678 | No alias | component *(LUG/LUH) of transcriptional co-repressor... | 0.06 | OrthoFinder output from all 47 species | |
Solyc02g078000.2.1 | LUH, Solyc02g078000 | transcriptional co-repressor (LUG) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016200_P001 | LUH, Zm00001e016200 | transcriptional co-repressor (LUG) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e020658_P005 | LUG, RON2, Zm00001e020658 | transcriptional co-repressor (LUG) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e027845_P004 | LUG, RON2, Zm00001e027845 | transcriptional co-repressor (LUG) | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005198 | structural molecule activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
BP | GO:0016192 | vesicle-mediated transport | IEA | Interproscan |
CC | GO:0030117 | membrane coat | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
No external refs found! |