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Aliases : Ceric.34G015100
Description : component *(ADA3) of SAGA transcription co-activator complex & original description: pacid=50623282 polypeptide=Ceric.34G015100.1.p locus=Ceric.34G015100 ID=Ceric.34G015100.1.v2.1 annot-version=v2.1
Gene families : OG0002109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.34G015100.1 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00031p00010980 | evm_27.TU.AmTr_v1... | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G29790 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G22450 | No alias | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g025103 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g29931 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05137 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Als_g29245 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g49585 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g10990 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g10991 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene32698.t1 | Aspi01Gene32698 | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0021.g015784 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g32253 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g46147 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g02394 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g12120 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01001003001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015158001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.1 | OrthoFinder output from all 47 species | |
| GSVIVT01036136001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_07255 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g73620.1 | LOC_Os01g73620 | component ADA3 of SAGA transcription co-activator complex | 0.1 | OrthoFinder output from all 47 species | |
| LOC_Os05g01690.1 | LOC_Os05g01690 | component ADA3 of SAGA transcription co-activator complex | 0.1 | OrthoFinder output from all 47 species | |
| Len_g10698 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g10282 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g27993 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| MA_107341g0010 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g06630.1 | No alias | component ADA3 of SAGA transcription co-activator complex | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g14668 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g18247 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18819 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.09 | OrthoFinder output from all 47 species | |
| Pir_g13632 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g43188 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011817 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48948 | No alias | component *(ADA3) of SAGA transcription co-activator... | 0.07 | OrthoFinder output from all 47 species | |
| Smo407119 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc07g040980.3.1 | Solyc07g040980 | component ADA3 of SAGA transcription co-activator complex | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g006960.2.1 | Solyc11g006960 | component ADA3 of SAGA transcription co-activator complex | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e018678_P002 | Zm00001e018678 | component ADA3 of SAGA transcription co-activator complex | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027665_P001 | Zm00001e027665 | component ADA3 of SAGA transcription co-activator complex | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e029688_P001 | Zm00001e029688 | component ADA3 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019340 | Histone_AcTrfase_su3 | 957 | 1042 |
| No external refs found! |