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  5. Ceric.28G060100.1

Ceric.28G060100.1 (Ceric.28G060100)


Aliases : Ceric.28G060100

Description : subunit gamma of cargo adaptor F-subcomplex & original description: pacid=50570184 polypeptide=Ceric.28G060100.1.p locus=Ceric.28G060100 ID=Ceric.28G060100.1.v2.1 annot-version=v2.1


Gene families : OG0004080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G060100.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g106385 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aev_g44391 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Als_g23314 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Aob_g15373 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Aop_g06505 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.20 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Cre06.g310750 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g01867 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Ehy_g29298 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031955001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Gb_36850 No alias subunit gamma of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Gb_36851 No alias Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g12590.1 LOC_Os03g12590 subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
LOC_Os07g10150.1 LOC_Os07g10150 subunit gamma of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Lfl_g02207 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Nbi_g10516 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Solyc01g109540.4.1 Solyc01g109540 subunit gamma of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
Zm00001e000949_P001 Zm00001e000949 subunit gamma of cargo adaptor F-subcomplex 0.12 OrthoFinder output from all 47 species
Zm00001e011398_P002 Zm00001e011398 subunit gamma of cargo adaptor F-subcomplex 0.08 OrthoFinder output from all 47 species
Zm00001e033065_P001 Zm00001e033065 subunit gamma of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030126 COPI vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030906 retromer, cargo-selective complex IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR032154 Coatomer_g_Cpla 778 891
IPR002553 Clathrin/coatomer_adapt-like_N 30 544
IPR013040 Coatomer_gsu_app_Ig-like_dom 631 775
No external refs found!