1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.28G050700.1

Ceric.28G050700.1 (Ceric.28G050700)


Aliases : Ceric.28G050700

Description : not classified & original description: pacid=50570551 polypeptide=Ceric.28G050700.1.p locus=Ceric.28G050700 ID=Ceric.28G050700.1.v2.1 annot-version=v2.1


Gene families : OG0004236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004236_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G050700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00149950 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
AT3G06980 No alias DEA(D/H)-box RNA helicase family protein 0.08 OrthoFinder output from all 47 species
Adi_g056846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre10.g436650 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g07014 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017719001 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
LOC_Os03g01830.1 LOC_Os03g01830 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Len_g02379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g11020.1 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
Nbi_g13305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005945 No alias not classified & original description: CDS=228-2279 0.03 OrthoFinder output from all 47 species
Sam_g16562 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo403724 No alias DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc11g045180.3.1 Solyc11g045180 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Spa_g15666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039095_P002 Zm00001e039095 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 248 421
IPR001650 Helicase_C 469 585
No external refs found!