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  5. Ceric.28G003400.1

Ceric.28G003400.1 (Ceric.28G003400)


Aliases : Ceric.28G003400

Description : nascent polypeptide chaperone *(TIG) & original description: pacid=50569779 polypeptide=Ceric.28G003400.1.p locus=Ceric.28G003400 ID=Ceric.28G003400.1.v2.1 annot-version=v2.1


Gene families : OG0005980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.28G003400.1

Target Alias Description ECC score Gene Family Method Actions
AT5G55220 No alias trigger factor type chaperone family protein 0.12 OrthoFinder output from all 47 species
Aev_g04634 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g23593 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene66835.t1 Aspi01Gene66835 nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0226.g058982 No alias nascent polypeptide chaperone *(TIG) & original... 0.04 OrthoFinder output from all 47 species
Cba_g11734 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Cre01.g001750 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Dac_g11398 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49269 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13726 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g03701 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01037722001 No alias Protein modification.protein folding and quality... 0.08 OrthoFinder output from all 47 species
LOC_Os06g20320.1 LOC_Os06g20320 nascent polypeptide chaperone (TF) 0.13 OrthoFinder output from all 47 species
Len_g12501 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g01704 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429151g0010 No alias nascent polypeptide chaperone (TF) 0.04 OrthoFinder output from all 47 species
Mp4g08590.1 No alias nascent polypeptide chaperone (TF) 0.03 OrthoFinder output from all 47 species
Msp_g06456 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11562 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g18081 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g14393 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29447 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g09346 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064950.3.1 Solyc07g064950 nascent polypeptide chaperone (TF) 0.07 OrthoFinder output from all 47 species
Spa_g01344 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008881 Trigger_fac_ribosome-bd_bac 85 228
No external refs found!