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  5. Ceric.23G019900.1

Ceric.23G019900.1 (Ceric.23G019900)


Aliases : Ceric.23G019900

Description : not classified & original description: pacid=50610174 polypeptide=Ceric.23G019900.1.p locus=Ceric.23G019900 ID=Ceric.23G019900.1.v2.1 annot-version=v2.1


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.23G019900.1

Target Alias Description ECC score Gene Family Method Actions
AT1G20880 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 OrthoFinder output from all 47 species
AT3G54770 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.04 OrthoFinder output from all 47 species
Adi_g055184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g34956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39475.t2 Aspi01Gene39475 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04437 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03322 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g082270.3.1 Solyc02g082270 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g07143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023856_P001 Zm00001e023856 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e028635_P002 Zm00001e028635 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 23 79
No external refs found!