Ceric.15G071100.1 (UBP12, Ceric.15G071100)

Aliases : UBP12, Ceric.15G071100

Description : not classified & original description: pacid=50640759 polypeptide=Ceric.15G071100.1.p locus=Ceric.15G071100 ID=Ceric.15G071100.1.v2.1 annot-version=v2.1

Gene families : OG0005085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005085_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.15G071100.1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g107348	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g33294	UBP12	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g06394	UBP12	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Als_g57720	UBP12	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Aop_g29880	UBP12	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene23681.t1	Aspi01Gene23681	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0006.g010362	UBP12	not classified & original description: CDS=350-7828	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021281.14	No alias	Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Dac_g27627	UBP12	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g23057	UBP12	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Dde_g12126	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g18112	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Gb_35991	UBP12	Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis...	0.09	OrthoFinder output from all 47 species
Len_g13952	UBP13	not classified & original description: none	0.08	OrthoFinder output from all 47 species
Lfl_g11501	UBP12	not classified & original description: none	0.08	OrthoFinder output from all 47 species
MA_10436921g0010	No alias	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
MA_1628982g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_17762g0010	No alias	no hits & (original description: none)	0.1	OrthoFinder output from all 47 species
MA_6934376g0010	No alias	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
MA_7843052g0010	UBP13	Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Nbi_g07531	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g43540	UBP12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g49066	UBP12	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020740	UBP12	not classified & original description: CDS=294-7754	0.06	OrthoFinder output from all 47 species
Smo447032	UBP12	Protein degradation.peptidase families.cysteine-type...	0.07	OrthoFinder output from all 47 species
Spa_g09112	UBP12	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Tin_g13986	UBP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0003712	transcription coregulator activity	IEP	HCCA
MF	GO:0003724	RNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0016459	myosin complex	IEP	HCCA
CC	GO:0016592	mediator complex	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0043248	proteasome assembly	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	1594	1960
IPR021905	DUF3517	2151	2444

External Links

No external refs found!

Ceric.15G071100.1 (UBP12, Ceric.15G071100)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation