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  5. Ceric.08G066500.1

Ceric.08G066500.1 (PDS3, PDS, PDE226,...)


Aliases : PDS3, PDS, PDE226, Ceric.08G066500

Description : phytoene desaturase *(PDS) & original description: pacid=50638153 polypeptide=Ceric.08G066500.1.p locus=Ceric.08G066500 ID=Ceric.08G066500.1.v2.1 annot-version=v2.1


Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.08G066500.1

Target Alias Description ECC score Gene Family Method Actions
AT4G14210 PDS3, PDS, PDE226 phytoene desaturase 3 0.02 OrthoFinder output from all 47 species
Ala_g09707 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g36080 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g509650 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.06 OrthoFinder output from all 47 species
Dac_g11776 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23615 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01016650001 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
Gb_34033 PDS3, PDS, PDE226 phytoene desaturase (PDS) 0.02 OrthoFinder output from all 47 species
LOC_Os03g08570.1 PDS3, PDS,... phytoene desaturase (PDS) 0.07 OrthoFinder output from all 47 species
Len_g09650 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01859 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.05 OrthoFinder output from all 47 species
Mp8g14330.1 PDS3, PDS, PDE226 phytoene desaturase (PDS) 0.04 OrthoFinder output from all 47 species
Pir_g10268 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Smo232430 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Tin_g02716 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000618_P002 PDS3, PDS,... phytoene desaturase (PDS) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004817 cysteine-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 103 544
No external refs found!