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Aliases : Ceric.03G033700
Description : not classified & original description: pacid=50572646 polypeptide=Ceric.03G033700.1.p locus=Ceric.03G033700 ID=Ceric.03G033700.1.v2.1 annot-version=v2.1
Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00175460 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00087p00144100 | evm_27.TU.AmTr_v1... | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| AT2G44710 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g075764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g25318 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g32982 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07409 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07470 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g22649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02358 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04897 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04938 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68576 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0182.g056457 | No alias | not classified & original description: CDS=29-2320 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g13057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13364 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020961.20 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g01827 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g10166 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015774001 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01018805001 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Gb_14149 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_21243 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38984 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g45930.3 | LOC_Os04g45930 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g08570.1 | LOC_Os10g08570 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Len_g09447 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10436637g0010 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10436637g0030 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_169053g0010 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8142g0020 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18521 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26284 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26930 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g32591 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g52292 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52296 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35273 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g062290.2.1 | Solyc02g062290 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc10g062180.2.1 | Solyc10g062180 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g062340.2.1 | Solyc10g062340 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g076870.2.1 | Solyc10g076870 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g07984 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47784 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g08252 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12919 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e007365_P001 | Zm00001e007365 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e041355_P001 | Zm00001e041355 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005730 | nucleolus | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
| MF | GO:0051540 | metal cluster binding | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |