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  5. Dcu_g49269

Dcu_g49269


Description : nascent polypeptide chaperone *(TIG) & original description: none


Gene families : OG0005980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dcu_g49269
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00190580 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
AT5G55220 No alias trigger factor type chaperone family protein 0.08 OrthoFinder output from all 47 species
Aev_g04634 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01821 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g23593 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0226.g058982 No alias nascent polypeptide chaperone *(TIG) & original... 0.03 OrthoFinder output from all 47 species
Cba_g11734 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G003400.1 Ceric.28G003400 nascent polypeptide chaperone *(TIG) & original... 0.05 OrthoFinder output from all 47 species
Dde_g13726 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01037722001 No alias Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
LOC_Os06g20320.1 LOC_Os06g20320 nascent polypeptide chaperone (TF) 0.07 OrthoFinder output from all 47 species
MA_10429151g0010 No alias nascent polypeptide chaperone (TF) 0.04 OrthoFinder output from all 47 species
Nbi_g11562 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18081 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g14393 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29447 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013451 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Solyc07g064950.3.1 Solyc07g064950 nascent polypeptide chaperone (TF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008881 Trigger_fac_ribosome-bd_bac 94 234
IPR008880 Trigger_fac_C 374 533
No external refs found!