- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0002719 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002719_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g23055 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00190880 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g076695 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g077934 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g105443 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15247 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g23892 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0060.g034750 | No alias | not classified & original description: CDS=32-3943 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11705 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g17171 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.08G054400.1 | Ceric.08G054400 | not classified & original description: pacid=50638201... | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g30974 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01024823001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Gb_01281 | No alias | no hits & (original description: none) | 0.12 | OrthoFinder output from all 47 species | |
| Len_g24505 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g07443 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g06792 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18248 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g33275 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g37630 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g37822 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0109.g020564 | No alias | not classified & original description: CDS=1-2943 | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g40488 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Solyc09g031650.3.1 | Solyc09g031650 | no hits & (original description: none) | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g55522 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45301 | PARL1, ATNUC-L1, NUC-L1 | regulatory protein *(NCL) of rRNA transcription &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e020396_P001 | Zm00001e020396 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027931_P001 | Zm00001e027931 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |