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Description : membrane trafficking factor *(GFS9) & original description: none
Gene families : OG0003462 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003462_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dcu_g01968 | |
| Cluster | HCCA: Cluster_38 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G28430 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g112310 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39003 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g32639 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Als_g30143 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g34035 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g30469 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene06204.t1 | Aspi01Gene06204 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene42412.t1 | Aspi01Gene42412 | membrane trafficking factor *(GFS9) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g014134 | No alias | membrane trafficking factor *(GFS9) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z252700.1 | Ceric.1Z252700 | membrane trafficking factor *(GFS9) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cre12.g515250 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029303001 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033943001 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_22834 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g11932 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10435655g0010 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g05320.1 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g03154 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g17207 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g31204 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Smo405955 | No alias | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| Solyc07g018100.2.1 | Solyc07g018100 | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g11706 | No alias | membrane trafficking factor *(GFS9) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e040667_P003 | Zm00001e040667 | Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | HCCA |
| CC | GO:0000145 | exocyst | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006497 | protein lipidation | IEP | HCCA |
| BP | GO:0006505 | GPI anchor metabolic process | IEP | HCCA |
| BP | GO:0006506 | GPI anchor biosynthetic process | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
| BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0007030 | Golgi organization | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0022406 | membrane docking | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
| BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0048278 | vesicle docking | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051640 | organelle localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| BP | GO:0140029 | exocytic process | IEP | HCCA |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019155 | CLEC16A/TT9_N | 42 | 192 |
| No external refs found! |