Dcu_g01308 (RPT5A, ATS6A.2)

Aliases : RPT5A, ATS6A.2

Description : regulatory component *(RPT5) of 26S proteasome & original description: none

Gene families : OG0003325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dcu_g01308

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008732	RPT5A, ATS6A.2	regulatory component *(RPT5) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Aop_g07899	RPT5A, ATS6A.2	regulatory component *(RPT5) of 26S proteasome &...	0.06	OrthoFinder output from all 47 species
Ceric.14G077800.1	RPT5A, ATS6A.2,...	regulatory component *(RPT5) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001187.20	RPT5A, ATS6A.2	26S proteasome regulatory subunit 6A homolog OS=Oryza...	0.02	OrthoFinder output from all 47 species
Cre10.g439150	RPT5A, ATS6A.2	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
LOC_Os02g56000.1	RPT5A, ATS6A.2,...	regulatory component RPT5 of 26S proteasome	0.07	OrthoFinder output from all 47 species
Lfl_g01430	RPT5A, ATS6A.2	regulatory component *(RPT5) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Mp3g09490.1	RPT5A, ATS6A.2	regulatory component RPT5 of 26S proteasome	0.06	OrthoFinder output from all 47 species
Ore_g13206	RPT5A, ATS6A.2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c5_21920V3.1	RPT5A, ATS6A.2,...	regulatory particle triple-A ATPase 5A	0.04	OrthoFinder output from all 47 species
Smo74992	RPT5A, ATS6A.2	Protein degradation.26S proteasome.regulatory...	0.04	OrthoFinder output from all 47 species
Solyc01g099760.3.1	RPT5A, ATS6A.2,...	regulatory component RPT5 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Spa_g12836	RPT5A, ATS6A.2	regulatory component *(RPT5) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Tin_g01827	RPT5A, ATS6A.2	regulatory component *(RPT5) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Zm00001e016153_P002	RPT5A, ATS6A.2,...	regulatory component RPT5 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Zm00001e031055_P001	RPT5A, ATS6A.2,...	regulatory component RPT5 of 26S proteasome	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004827	proline-tRNA ligase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008641	ubiquitin-like modifier activating enzyme activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019781	NEDD8 activating enzyme activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0045116	protein neddylation	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	209	341
IPR032501	Prot_ATP_ID_OB_C	75	151
IPR041569	AAA_lid_3	364	408

External Links

No external refs found!

Dcu_g01308 (RPT5A, ATS6A.2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation