Spa_g51272


Description : not classified & original description: none


Gene families : OG0005000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g51272

Target Alias Description ECC score Gene Family Method Actions
AT2G32640 No alias Lycopene beta/epsilon cyclase protein 0.03 OrthoFinder output from all 47 species
Adi_g015811 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aev_g07877 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g13267 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g16632 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16513 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021441.9 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre04.g221550 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g09140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02842 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03750 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01030484001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_08260 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g32630.1 LOC_Os08g32630 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Lfl_g01577 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Nbi_g08869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13285 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0159.g023813 No alias RsmD-type rRNA methyltransferase & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g11865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo95494 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g102950.3.1 Solyc01g102950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g27372 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e022396_P002 Zm00001e022396 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!