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Description : plastidial RNA splicing factor *(HPE1) & original description: none
Gene families : OG0007581 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007581_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g30782 | |
| Cluster | HCCA: Cluster_90 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G70200 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g012143 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01358 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13535 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g26366 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g01458 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g22070.1 | LOC_Os02g22070 | HPE1 plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species | |
| Len_g14318 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10435608g0010 | No alias | HPE1 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g21620.1 | No alias | HPE1 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g01582 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.09 | OrthoFinder output from all 47 species | |
| Nbi_g24330 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06305 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40721 | No alias | plastidial RNA splicing factor *(HPE1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g006070.4.1 | Solyc05g006070 | HPE1 plastidial RNA splicing factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e013842_P001 | Zm00001e013842 | HPE1 plastidial RNA splicing factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |