Heatmap: Cluster_90 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Young Sterile Leaflet
Mature Sterile Leaflet
Fertile Leaflet
Young Primary Rachis
Mature Primary Rachis
Young Petiole
Mature Petiole
Crozier
Rhizome
Root
1.53 1.36 -0.42 -0.44 -0.92 -0.63 -1.31 -0.44 -1.22 -1.65
Spa_g00094 (SEP1)
1.25 1.42 -0.41 -0.1 -0.65 -0.25 -0.8 -1.29 -1.07 -1.61
1.31 1.6 -1.0 -0.27 -0.54 -0.34 -0.81 -1.13 -1.16 -2.33
1.42 1.22 -0.66 0.13 -0.5 -0.01 -0.82 -1.11 -1.74 -2.07
1.4 1.22 -0.46 -0.07 -0.8 -0.16 -0.93 -0.91 -1.08 -1.54
1.36 1.34 -0.72 -0.21 -0.61 -0.22 -0.88 -0.9 -0.93 -1.65
1.61 1.62 -0.94 -0.54 -1.17 -0.72 -1.33 -0.75 -1.29 -2.33
1.29 1.46 -0.36 -0.55 -0.61 -0.59 -0.78 -0.71 -1.16 -1.38
Spa_g02789 (LHB1B2)
2.32 1.91 -1.46 -2.01 -2.45 -2.84 -3.64 -2.71 -4.68 -5.08
Spa_g02826 (OEC33)
2.01 1.88 -1.89 -0.37 -2.45 -0.95 -3.84 -1.3 -4.49 -5.89
1.58 1.73 -0.41 -0.42 -1.25 -0.13 -1.02 -4.45 -1.64 -7.45
Spa_g03449 (LHB1B2)
1.55 1.35 -0.54 0.19 -0.45 -0.26 -0.94 -1.91 -1.79 -4.39
1.65 1.46 -0.69 -0.23 -0.93 -0.24 -1.09 -1.72 -1.87 -2.21
Spa_g04007 (PSB27)
1.8 1.84 -1.06 -0.45 -1.4 -0.86 -2.12 -1.53 -2.68 -3.66
1.44 1.2 -0.75 -0.15 -1.03 -0.67 -0.97 0.15 -1.06 -1.82
1.46 1.37 -0.74 0.12 -0.96 -0.23 -1.2 -1.02 -1.36 -1.78
1.59 1.24 -0.85 -0.52 -0.95 -0.89 -0.95 0.02 -0.99 -1.82
1.43 1.71 -0.69 -0.09 -1.0 -0.36 -1.3 -1.75 -2.03 -2.03
Spa_g04655 (TWN3)
1.57 1.45 -0.8 -0.3 -0.79 -0.54 -1.14 -0.7 -1.57 -2.08
Spa_g04656 (TWN3)
1.36 1.43 -0.57 -0.18 -0.77 -0.65 -1.13 -0.68 -1.13 -1.27
Spa_g04749 (CHLM)
1.86 1.75 -1.12 -1.16 -1.09 -1.58 -1.3 -0.73 -2.03 -4.27
1.5 1.38 -1.17 -0.09 -1.52 -0.41 -1.6 0.1 -1.0 -2.49
1.58 1.42 -0.89 -0.16 -1.03 -0.38 -1.36 -0.61 -1.35 -2.43
Spa_g04945 (LHCA2)
1.47 1.64 -1.53 0.48 -1.6 0.06 -2.22 -1.09 -2.09 -3.84
Spa_g04947 (LHCB5)
1.42 1.66 -1.34 0.05 -1.05 -0.13 -1.45 -0.51 -2.2 -4.54
1.55 1.23 -0.66 -0.03 -0.99 -0.18 -1.11 -0.75 -1.32 -1.84
1.11 1.24 -0.06 -0.22 -1.07 -0.3 -1.06 -0.02 -0.88 -1.44
Spa_g05331 (PSB27)
1.66 1.56 -1.66 0.25 -1.15 -0.53 -1.52 -1.19 -1.28 -4.18
Spa_g05418 (APX4)
1.65 1.18 -0.8 -0.29 -1.19 -0.47 -1.18 -0.21 -1.21 -1.71
Spa_g05570 (AVP1)
2.0 1.54 -1.82 0.15 -1.47 0.03 -2.75 -2.86 -6.29 -6.93
1.42 1.55 -0.61 -0.24 -0.74 -0.38 -1.07 -1.05 -1.69 -2.0
Spa_g05629 (Deg1)
1.39 1.59 -0.79 -0.05 -1.18 -0.21 -1.37 -1.21 -1.51 -1.5
1.92 1.37 -1.09 -0.37 -0.89 -0.69 -0.91 -1.57 -2.55 -2.46
Spa_g05781 (RPL9)
1.46 1.16 -0.82 -0.11 -0.87 -0.04 -1.23 -0.18 -1.07 -2.27
1.52 1.74 -1.21 -0.14 -1.52 -0.56 -1.74 -0.54 -1.74 -2.78
Spa_g06473 (RPL15)
1.67 1.61 -0.99 -0.07 -1.08 -0.45 -1.58 -1.4 -2.58 -2.19
Spa_g06559 (CYP38)
1.6 1.43 -0.63 -0.22 -1.34 -0.59 -1.57 -0.36 -1.7 -1.82
Spa_g06611 (HEME2)
1.75 1.34 -0.58 -0.23 -1.18 -0.56 -1.4 -0.75 -1.71 -2.53
1.36 0.94 -0.11 -0.16 -0.55 -0.29 -0.69 -0.99 -0.9 -0.93
1.34 1.08 -0.23 -0.27 -0.41 -0.45 -0.68 -0.74 -0.92 -1.21
Spa_g07161 (SECE1)
1.47 1.18 -0.37 -0.0 -0.73 -0.34 -1.02 -1.07 -1.2 -1.33
1.58 1.3 -0.61 -0.1 -0.88 -0.22 -1.22 -1.33 -1.95 -1.09
1.52 1.26 -0.12 -0.0 -1.17 -0.4 -1.19 -1.22 -1.55 -1.28
Spa_g07561 (ATPD)
1.8 2.01 -1.26 -0.58 -1.86 -0.75 -2.48 -2.01 -3.52 -5.55
Spa_g07743 (RPS1)
1.49 1.09 -0.23 -0.23 -0.78 -0.31 -0.94 -0.94 -1.15 -1.1
Spa_g07765 (UVR3)
1.41 1.53 -0.5 -0.32 -0.88 -0.25 -1.37 -0.44 -2.5 -1.95
Spa_g08046 (LHCA5)
1.59 1.67 -0.92 -0.14 -1.17 -0.22 -1.65 -1.52 -2.46 -2.16
1.58 1.83 -0.65 -0.73 -0.9 -0.86 -1.25 -1.8 -2.22 -2.2
Spa_g08465 (CP31)
1.31 1.17 -0.48 -0.29 -0.48 -0.27 -0.51 -0.76 -0.93 -1.41
Spa_g08718 (RPL12-C)
1.23 1.4 -0.63 -0.02 -0.68 -0.11 -0.93 -0.78 -0.95 -2.22
Spa_g08728 (RPL4)
1.69 1.38 -1.1 -0.43 -1.17 -0.72 -1.35 -0.2 -1.08 -2.55
1.55 1.3 -0.46 -0.14 -0.75 -0.13 -1.01 -1.57 -1.59 -1.78
Spa_g09685 (LPA1)
1.05 1.19 -0.25 -0.24 -0.71 -0.09 -0.65 -0.41 -0.72 -1.27
Spa_g09692 (SPS1)
1.46 1.45 0.09 -0.7 -1.83 -0.82 -2.14 0.13 -1.51 -1.62
2.0 1.66 -0.73 -0.63 -1.93 -1.08 -2.82 -0.83 -3.91 -3.38
Spa_g10009 (CSP41A)
1.76 1.93 -1.69 -0.23 -2.05 -0.6 -2.6 -1.42 -2.92 -4.35
0.87 1.1 -0.21 -0.09 -0.4 -0.14 -0.4 -0.62 -0.53 -1.14
1.37 1.68 -0.8 -0.27 -1.02 -0.45 -1.09 -1.14 -1.55 -1.72
1.52 0.99 -0.45 -0.31 -0.65 -0.35 -0.88 -0.63 -0.99 -1.06
Spa_g11042 (emb2394)
1.44 1.42 -0.78 -0.09 -0.8 -0.38 -0.91 -0.91 -1.21 -1.97
1.29 1.45 -0.41 -0.34 -0.59 -0.45 -0.59 -1.17 -1.11 -1.67
Spa_g11354 (HCF106)
1.16 1.23 -0.77 -0.19 -0.48 -0.25 -0.39 -0.84 -0.49 -1.46
1.9 2.03 -0.88 -0.75 -2.73 -0.94 -3.53 -2.86 -4.08 -3.4
1.75 1.49 -1.78 -0.63 -0.83 -0.83 -1.48 0.1 -2.35 -2.87
2.05 1.43 -0.98 -0.74 -1.18 -0.91 -1.6 -1.77 -2.03 -2.12
Spa_g11701 (AMT1;2)
1.74 1.93 -1.08 -0.49 -2.0 -0.56 -2.33 -1.35 -3.61 -4.21
1.37 1.21 -0.6 -0.15 -0.77 -0.25 -0.97 -0.41 -0.84 -1.8
Spa_g11754 (PSAO)
1.54 1.76 -1.23 0.19 -1.27 -0.49 -1.95 -0.99 -2.36 -4.46
Spa_g11755 (PSAO)
1.53 1.79 -1.36 -0.07 -1.2 -0.75 -1.74 -0.54 -2.08 -4.07
1.72 1.55 -0.98 0.09 -1.78 -0.25 -2.0 -0.92 -2.66 -2.87
Spa_g12334 (PPOX)
1.3 1.05 -0.67 -0.28 -0.7 -0.24 -0.84 -0.18 -0.58 -1.17
Spa_g12575 (LHCB2)
1.4 1.66 -0.27 -0.06 -0.64 -0.22 -1.31 -1.76 -2.53 -4.77
Spa_g12576 (LHCB2)
1.56 1.7 -0.93 -0.06 -0.63 -0.31 -1.22 -1.88 -2.6 -6.29
Spa_g12577 (LHCB2)
1.62 1.95 -1.23 -0.35 -0.65 -0.84 -1.56 -2.08 -3.82 -5.62
1.39 1.26 -0.69 0.1 -1.14 -0.04 -1.16 -0.5 -1.22 -1.77
1.47 1.13 -0.52 -0.17 -0.95 -0.37 -1.25 -0.15 -1.03 -1.46
1.4 1.51 -0.44 -0.46 -0.79 -0.58 -0.82 -1.12 -1.54 -1.27
Spa_g12995 (HCF136)
1.69 1.63 -0.94 0.1 -1.49 -0.23 -1.9 -1.97 -2.6 -2.42
0.99 0.96 -0.27 -0.26 -0.28 -0.36 -0.5 -0.14 -0.57 -0.98
Spa_g13142 (CEST)
1.45 1.6 -0.16 -0.23 -1.09 -0.36 -1.3 -1.55 -1.96 -2.06
1.36 1.27 -0.37 -0.65 -0.54 -0.63 -0.57 -0.48 -0.91 -1.49
1.84 1.69 -0.84 -0.38 -1.5 -0.41 -1.78 -2.37 -2.57 -3.08
1.18 1.59 -0.22 -0.28 -0.48 -0.56 -0.73 -1.25 -1.72 -1.69
1.7 1.67 -1.08 -0.65 -0.99 -0.9 -1.16 -1.27 -1.87 -1.81
Spa_g14970 (AMT1;2)
1.94 2.06 -2.38 -0.53 -2.23 -0.55 -3.54 -3.64 -5.63 -5.35
1.98 1.45 -0.99 -0.25 -1.64 -0.51 -1.93 -2.2 -1.73 -2.51
1.58 1.3 -0.59 -0.85 -0.62 -1.13 -0.77 -0.21 -0.83 -2.25
1.6 1.81 -1.48 0.11 -1.19 -0.31 -1.66 -1.73 -3.08 -4.26
Spa_g15828 (UGT85A4)
1.84 1.71 -0.47 -1.19 -2.35 -1.2 -3.89 -0.53 -0.99 -3.35
1.29 1.28 -0.79 -0.64 -0.78 -0.55 -0.92 0.23 -0.62 -1.78
1.06 1.09 -0.31 -0.25 -0.51 -0.35 -0.38 -1.07 -0.59 -0.42
Spa_g16044 (SKL2)
1.56 1.07 -0.31 -0.6 -0.63 -0.42 -0.57 -0.81 -0.79 -1.79
Spa_g16166 (SIGB)
1.41 1.17 -0.41 -0.08 -0.59 -0.15 -0.93 -0.76 -1.54 -1.41
Spa_g16220 (PRPL11)
1.98 1.39 -0.42 -0.37 -1.71 -0.51 -2.0 -1.83 -2.29 -2.49
1.29 1.07 -0.85 -0.01 -0.8 -0.16 -1.13 -0.06 -0.76 -1.25
1.67 1.31 -0.54 -0.18 -0.94 -0.14 -1.47 -1.2 -1.57 -2.25
Spa_g16729 (LHCB2)
1.64 1.16 0.23 -0.18 -0.81 -0.36 -1.41 -1.86 -1.53 -2.06
1.4 1.43 -0.4 0.02 -0.73 -0.26 -1.07 -1.05 -1.68 -2.42
Spa_g17586 (GC1)
1.87 1.68 -1.03 -0.44 -1.95 -0.61 -2.6 -0.85 -2.51 -3.36
1.87 1.42 -0.83 -0.75 -1.11 -1.03 -1.19 -1.44 -2.36 -0.85
Spa_g17778 (LHCB3)
1.59 2.02 -1.58 -0.59 -0.78 -0.85 -1.5 -2.15 -2.66 -4.05
1.82 1.82 -1.55 -0.16 -1.92 -0.38 -2.34 -1.95 -3.26 -3.26
1.61 1.36 -0.45 -0.42 -0.5 -0.66 -0.97 -1.2 -1.55 -1.86
1.14 0.78 -0.33 -0.14 -0.62 -0.22 -0.74 -0.06 -0.24 -1.12
1.16 1.13 -0.41 -0.28 -0.68 -0.35 -0.71 -0.06 -0.77 -1.17
1.54 1.95 -1.44 -0.19 -1.07 -0.45 -2.24 -1.77 -2.78 -2.82
Spa_g18930 (PGM)
1.31 1.14 -0.11 -0.33 -0.88 -0.22 -0.91 -0.9 -0.34 -1.57
1.04 1.1 -0.11 -0.08 -0.7 -0.3 -0.87 -0.07 -0.55 -1.69
Spa_g19121 (SFD4)
1.35 1.54 -0.77 -0.43 -0.82 -0.58 -1.13 -0.42 -1.39 -1.32
1.08 1.14 -0.37 -0.03 -0.76 -0.07 -0.73 -0.47 -0.62 -1.26
Spa_g21350 (LHB1B2)
1.61 1.58 -0.97 -0.36 -0.25 -0.63 -0.64 -2.18 -1.91 -4.43
Spa_g21623 (PSB28)
1.38 1.64 -0.86 -0.38 -1.06 -0.36 -1.28 -0.66 -1.17 -2.1
Spa_g22371 (LHCB2)
1.65 1.9 -1.33 -0.42 -0.48 -0.64 -1.35 -2.44 -4.28 -6.24
Spa_g22930 (ACSF)
1.52 1.17 -0.19 -0.12 -0.97 -0.03 -1.31 -0.71 -1.26 -2.54
1.84 1.26 -0.46 -0.66 -0.87 -0.65 -1.46 -1.05 -1.22 -2.36
1.34 1.15 -0.5 -0.13 -0.4 -0.23 -1.07 -1.35 -0.76 -0.83
1.25 1.17 -0.5 -0.26 -0.57 -0.44 -0.7 -0.16 -0.74 -1.72
1.43 1.28 -0.61 -0.4 -0.84 -0.27 -0.93 -1.05 -0.32 -1.86
1.66 1.42 -0.63 -0.45 -1.74 0.08 -1.57 -0.62 -2.13 -2.25
1.12 0.99 -0.23 -0.44 -0.47 -0.25 -0.51 -0.22 -0.51 -1.23
Spa_g26242 (RPL9)
1.52 1.24 -1.18 -0.02 -0.7 -0.39 -1.33 -0.07 -1.36 -2.15
1.71 1.67 -0.77 0.02 -1.98 -0.42 -2.47 -1.53 -2.09 -2.39
Spa_g29201 (PSBX)
1.72 1.53 -1.18 0.07 -2.29 -0.34 -2.78 -0.42 -2.52 -1.97
Spa_g29645 (LHCB3)
1.76 1.29 0.27 -0.12 -1.47 -0.32 -2.44 -1.29 -2.18 -4.44
1.58 1.38 -1.03 -0.31 -0.67 -0.32 -0.78 -1.45 -1.24 -1.65
1.2 1.28 -0.55 -0.41 -0.85 -0.48 -0.99 -0.02 -0.35 -1.72
1.27 1.05 -0.88 0.06 -0.65 -0.06 -0.86 -0.17 -0.7 -1.87
1.1 0.79 -0.44 0.02 -0.41 -0.07 -0.59 -0.42 -0.56 -0.8
1.13 1.33 -0.29 -0.11 -0.6 -0.32 -0.68 -0.49 -1.07 -1.83
Spa_g41881 (LHB1B2)
1.6 1.81 -0.75 -0.59 -0.53 -1.09 -1.26 -1.86 -2.49 -2.57
1.49 1.17 -0.84 -0.67 -0.32 -0.75 -0.28 -0.98 -0.59 -1.43
Spa_g42268 (CP24)
1.4 1.48 -1.05 0.24 -1.31 0.11 -1.85 -0.48 -2.15 -2.38
Spa_g43709 (NPQ1)
1.26 1.36 -0.26 -0.01 -0.79 -0.02 -1.13 -0.81 -1.62 -1.82
Spa_g46739 (PSRP5)
1.2 1.22 -0.64 -0.24 -0.68 -0.37 -0.92 -0.12 -0.81 -1.13
Spa_g46754 (PSRP4)
1.59 1.24 -0.51 0.14 -1.08 -0.02 -1.31 -1.42 -1.83 -1.7
1.73 1.22 -0.3 -0.71 -0.61 -0.74 -0.79 -1.52 -1.51 -1.33
Spa_g48114 (CS17)
1.9 1.49 -0.82 -0.53 -1.37 -0.82 -1.5 -1.23 -1.72 -2.54
1.54 1.33 -0.55 -0.38 -1.27 -0.45 -1.34 -0.48 -0.8 -1.77
1.28 1.41 -0.24 -0.22 -0.94 -0.27 -1.08 -0.86 -1.06 -1.49
1.65 1.31 -0.61 -0.07 -0.82 -0.58 -1.06 -0.91 -2.05 -1.89
1.52 1.33 -0.52 -0.17 -1.07 -0.49 -1.28 -0.97 -0.74 -1.66
Spa_g50863 (FKBP13)
1.32 1.45 -0.76 -0.51 -1.22 -0.81 -1.39 0.13 -0.61 -1.57
Spa_g50931 (LHCB4.1)
1.68 1.84 -1.88 0.29 -1.56 -0.25 -2.23 -2.41 -3.0 -5.75
Spa_g51015 (GDC1)
1.56 1.01 -0.48 -0.31 -0.57 -0.39 -0.9 -0.8 -0.73 -1.44
Spa_g51028 (LPA19)
1.76 2.01 -0.91 -0.66 -2.35 -1.1 -2.78 -1.83 -2.22 -3.38
2.03 1.63 -0.95 -0.3 -2.05 -0.37 -2.6 -2.86 -4.56 -2.94
1.55 1.12 -0.9 -0.71 -0.15 -0.81 -0.38 -0.92 -0.53 -1.76
1.28 1.15 -0.14 -0.35 -0.59 -0.23 -1.33 -0.38 -0.7 -1.47
Spa_g51870 (HEMC)
1.74 1.24 -0.41 -0.67 -0.75 -0.28 -1.13 -0.85 -1.53 -2.78
1.32 1.17 -1.15 0.23 -0.62 -0.04 -1.11 -0.31 -0.99 -2.17
1.5 1.5 -1.06 0.3 -1.89 0.18 -2.44 -0.52 -2.02 -3.14
1.57 1.92 -1.27 -0.46 -0.24 -0.71 -1.51 -2.54 -3.29 -7.06
1.08 1.02 -0.15 0.01 -0.67 -0.12 -0.89 -0.28 -0.85 -1.03
Spa_g53717 (OEC33)
1.6 1.88 -1.81 -0.35 -0.93 -0.76 -1.43 -1.3 -2.25 -3.04
1.54 1.37 -1.11 -0.19 -0.86 -0.25 -1.06 -0.71 -1.39 -1.72
2.2 2.07 -0.75 -2.72 -3.11 -2.85 -3.53 -4.53 -5.95 -4.44
1.38 1.24 0.03 -0.65 -1.07 -0.59 -1.5 0.06 -0.84 -1.88
Spa_g54810 (CSD2)
1.34 1.46 -0.72 0.19 -1.29 -0.16 -1.65 -0.63 -1.42 -1.66
Spa_g54890 (CP24)
1.81 1.59 -1.49 0.32 -1.94 0.03 -2.85 -1.66 -2.95 -5.78
1.33 1.28 -0.24 -0.16 -0.98 0.0 -1.5 -1.06 -1.28 -0.83
2.02 1.57 -1.68 0.2 -1.33 -0.17 -2.74 -4.23 -7.85 -5.06
Spa_g56297 (LHCB3)
1.55 1.92 -2.25 -0.71 -0.28 -0.99 -1.11 -1.51 -2.1 -3.33
2.02 1.6 -1.21 -0.8 -2.0 -1.42 -2.65 -0.21 -1.9 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.