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  5. Spa_g25613

Spa_g25613


Description : component *(eIF2-alpha) of eIF2 Met-tRNA binding factor complex & original description: none


Gene families : OG0003497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25613
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT2G40290 No alias Eukaryotic translation initiation factor 2 subunit 1 0.05 OrthoFinder output from all 47 species
Aop_g13735 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Cre12.g490000 No alias Protein biosynthesis.translation... 0.05 OrthoFinder output from all 47 species
Dac_g15381 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.06 OrthoFinder output from all 47 species
GSVIVT01032762001 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
LOC_Os03g18510.1 LOC_Os03g18510 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.04 OrthoFinder output from all 47 species
Lfl_g01263 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Mp2g08380.1 No alias component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.05 OrthoFinder output from all 47 species
Nbi_g41030 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Smo267638 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Solyc03g095840.3.1 Solyc03g095840 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species
Spa_g07806 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.03 OrthoFinder output from all 47 species
Tin_g01777 No alias component *(eIF2-alpha) of eIF2 Met-tRNA binding factor... 0.05 OrthoFinder output from all 47 species
Zm00001e038398_P001 Zm00001e038398 component eIF2-alpha of eIF2 Met-tRNA binding factor complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004334 fumarylacetoacetase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006399 tRNA metabolic process ORF107E, Aspi01Gene12840IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP HCCA
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 14 88
IPR011488 TIF_2_asu 126 256
No external refs found!