Spa_g15501 (EMB2369)

Aliases : EMB2369

Description : leucine-tRNA ligase & original description: none

Gene families : OG0005525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005525_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g15501
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00046740	EMB2369,...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Adi_g109524	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g11026	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g03591	EMB2369	leucine-tRNA ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.03G067300.1	EMB2369, Ceric.03G067300	leucine-tRNA ligase & original description:...	0.08	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000865.51	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Cre13.g578451	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.03	OrthoFinder output from all 47 species
Dac_g01026	EMB2369	leucine-tRNA ligase & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g03124	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07073	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g01662	EMB2369	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01012668001	EMB2369	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Gb_36904	EMB2369	leucine-tRNA ligase	0.03	OrthoFinder output from all 47 species
Lfl_g03404	EMB2369	leucine-tRNA ligase & original description: none	0.03	OrthoFinder output from all 47 species
MA_413765g0010	EMB2369	leucine-tRNA ligase	0.02	OrthoFinder output from all 47 species
MA_9972763g0010	EMB2369	Leucine--tRNA ligase, chloroplastic/mitochondrial...	0.07	OrthoFinder output from all 47 species
Mp3g22600.1	EMB2369	leucine-tRNA ligase	0.02	OrthoFinder output from all 47 species
Sam_g16597	No alias	leucine-tRNA ligase & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g080990.2.1	EMB2369, Solyc02g080990	leucine-tRNA ligase	0.04	OrthoFinder output from all 47 species
Zm00001e025691_P001	EMB2369, Zm00001e025691	leucine-tRNA ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008235	metalloexopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
CC	GO:0032993	protein-DNA complex	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
CC	GO:0044815	DNA packaging complex	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
MF	GO:0070006	metalloaminopeptidase activity	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015413	Methionyl/Leucyl_tRNA_Synth	137	269
IPR025709	Leu_tRNA-synth_edit	318	504
IPR002300	aa-tRNA-synth_Ia	740	776
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	829	941

External Links

No external refs found!

Spa_g15501 (EMB2369)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation