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  5. Spa_g09811

Spa_g09811


Description : not classified & original description: none


Gene families : OG0001761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g09811
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT4G39520 No alias GTP-binding protein-related 0.03 OrthoFinder output from all 47 species
Adi_g011447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29876.t1 Aspi01Gene29876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53161.t1 Aspi01Gene53161 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.24G065500.1 Ceric.24G065500 not classified & original description: pacid=50629763... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.31 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Cre01.g058886 No alias Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre06.g252450 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01022232001 No alias Developmentally-regulated G-protein 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os05g28940.1 LOC_Os05g28940 Developmentally-regulated G-protein 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g43470.1 LOC_Os07g43470 Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g00544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g051830.4.1 Solyc04g051830 Developmentally-regulated G-protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Tin_g06485 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 66 158
IPR031662 GTP-binding_2 186 291
IPR004095 TGS 292 366
No external refs found!