Aliases : UPL3, KAK
Description : E3 ubiquitin ligase *(UPL3) & original description: none
Gene families : OG0001729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001729_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Spa_g06979 | |
Cluster | HCCA: Cluster_84 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00100p00119160 | UPL3, KAK,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AT4G38600 | UPL3, KAK | HEAT repeat ;HECT-domain (ubiquitin-transferase) | 0.05 | OrthoFinder output from all 47 species | |
Adi_g077989 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ala_g02725 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Als_g47900 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g20762 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene26232.t1 | UPL3, KAK,... | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G061600.1 | UPL3, KAK,... | E3 ubiquitin ligase *(UPL3) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.02G085400.1 | UPL3, KAK,... | E3 ubiquitin ligase *(UPL3) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g20263 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dde_g21337 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g08697 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g09278 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01018731001 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01024033001 | UPL3, KAK | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Gb_07121 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Gb_07122 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Gb_20277 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
Len_g19132 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g02474 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
MA_10426439g0010 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
MA_10434379g0010 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
MA_140610g0010 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
MA_62286g0020 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.03 | OrthoFinder output from all 47 species | |
Mp1g24750.1 | UPL3, KAK | monomeric E3 ubiquitin ligase (HECT) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g25162 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g25807 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g17671 | UPL3, KAK | E3 ubiquitin ligase *(UPL3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g29297 | No alias | E3 ubiquitin ligase *(UPL3) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Solyc01g111530.3.1 | UPL3, KAK, Solyc01g111530 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species | |
Tin_g02200 | UPL3, KAK | E3 ubiquiTin ligase *(UPL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e013385_P003 | UPL3, KAK, Zm00001e013385 | monomeric E3 ubiquitin ligase (HECT) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004594 | pantothenate kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0015936 | coenzyme A metabolic process | IEP | HCCA |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | HCCA |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | HCCA |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000569 | HECT_dom | 1588 | 1924 |
No external refs found! |