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  4. Sequence
  5. Spa_g06342

Spa_g06342


Description : not classified & original description: none


Gene families : OG0007249 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007249_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g06342

Target Alias Description ECC score Gene Family Method Actions
AT5G62140 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Adi_g014998 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g00728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08737 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g01297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19336 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Azfi_s0167.g054531 No alias not classified & original description: CDS=285-1055 0.04 OrthoFinder output from all 47 species
Cba_g09287 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g06848 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01010637001 No alias No description available 0.14 OrthoFinder output from all 47 species
LOC_Os02g45460.1 LOC_Os02g45460 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g28021 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
MA_422522g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g17680.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g45131 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g00435 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
Ore_g06128 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12649 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07177 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo96271 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g026330.4.1 Solyc03g026330 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Tin_g06429 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Zm00001e023226_P001 Zm00001e023226 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!