Spa_g04552


Description : component *(bL19c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002345 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002345_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g04552
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00210720 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
AT4G17560 No alias Ribosomal protein L19 family protein 0.08 OrthoFinder output from all 47 species
AT5G47190 No alias Ribosomal protein L19 family protein 0.04 OrthoFinder output from all 47 species
Aev_g45795 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aob_g08190 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g12532 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cba_g10751 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.24G049700.1 Ceric.24G049700 component *(bL19c) of large plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Cre07.g322500 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre17.g734450 No alias 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride 0.09 OrthoFinder output from all 47 species
Dac_g03571 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.12 OrthoFinder output from all 47 species
Dcu_g09086 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dde_g00499 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ehy_g05444 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g06479 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g13874 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01002112001 No alias Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
Gb_05695 No alias component psRPL19 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os02g43600.1 LOC_Os02g43600 component psRPL19 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Len_g08100 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Lfl_g33279 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_947876g0010 No alias 50S ribosomal protein L19-1, chloroplastic... 0.09 OrthoFinder output from all 47 species
Mp3g02740.1 No alias component mtRPL19 of large ribosomal subunit proteome.... 0.1 OrthoFinder output from all 47 species
Msp_g09265 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Nbi_g00593 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012817 No alias not classified & original description: CDS=1-963 0.07 OrthoFinder output from all 47 species
Sam_g17563 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc08g078010.3.1 Solyc08g078010 component psRPL19 of large ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Tin_g01651 No alias component *(bL19c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e015296_P001 Zm00001e015296 component psRPL19 of large ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030091 protein repair IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001857 Ribosomal_L19 137 233
No external refs found!