Ore_g44793

Description : component *(FtsHi) of protein translocation ATPase motor complex & original description: none

Gene families : OG0007422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007422_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g44793
Cluster	HCCA: Cluster_152

Target	Alias	Description	ECC score	Gene Family Method
AT4G23940	No alias	FtsH extracellular protease family	0.03	OrthoFinder output from all 47 species
Adi_g021129	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.06	OrthoFinder output from all 47 species
Aev_g01572	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Azfi_s0144.g051562	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Ceric.06G050800.1	Ceric.06G050800	component *(FtsHi) of protein translocation ATPase motor...	0.06	OrthoFinder output from all 47 species
Dac_g45732	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Dcu_g01962	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.02	OrthoFinder output from all 47 species
GSVIVT01019239001	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.06	OrthoFinder output from all 47 species
Lfl_g02382	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.05	OrthoFinder output from all 47 species
MA_10435856g0010	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.09	OrthoFinder output from all 47 species
Mp6g01370.1	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.05	OrthoFinder output from all 47 species
Msp_g13592	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.03	OrthoFinder output from all 47 species
Sam_g13538	No alias	component *(FtsHi) of protein translocation ATPase motor...	0.04	OrthoFinder output from all 47 species
Smo98591	No alias	Probable inactive ATP-dependent zinc metalloprotease...	0.03	OrthoFinder output from all 47 species
Solyc08g082530.4.1	Solyc08g082530	Probable inactive ATP-dependent zinc metalloprotease...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	Interproscan
MF	GO:0004222	metalloendopeptidase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004827	proline-tRNA ligase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006536	glutamate metabolic process	IEP	HCCA
BP	GO:0006537	glutamate biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
MF	GO:0015930	glutamate synthase activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030976	thiamine pyrophosphate binding	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0050997	quaternary ammonium group binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	484	623
IPR000642	Peptidase_M41	713	818

External Links

No external refs found!

Ore_g44793

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation