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  5. Ore_g43940

Ore_g43940 (STI)


Aliases : STI

Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43940

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00169350 evm_27.TU.AmTr_v1... Protein STICHEL-like 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Ala_g14552 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25786 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26223 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33497 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07598 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17546 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29780 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69487 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24416.t1 STI, Aspi01Gene24416 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48229.t1 STI, Aspi01Gene48229 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53747.t1 Aspi01Gene53747 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015008 STI not classified & original description: CDS=518-3727 0.02 OrthoFinder output from all 47 species
Ceric.09G075500.1 STI, Ceric.09G075500 not classified & original description: pacid=50588395... 0.03 OrthoFinder output from all 47 species
Ceric.27G034600.1 STI, Ceric.27G034600 not classified & original description: pacid=50605520... 0.06 OrthoFinder output from all 47 species
Ceric.36G004000.1 Ceric.36G004000 not classified & original description: pacid=50568113... 0.03 OrthoFinder output from all 47 species
Dac_g36053 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g00963 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12787 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12871 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29947 STI not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_11323 STI Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g08753 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20046 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21279 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25691 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32095 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26781 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05199 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58288 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59410 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39989 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18267 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50154 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01269 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13709 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006189 'de novo' IMP biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 519 583
No external refs found!