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  5. Ore_g43618

Ore_g43618


Description : EC_5.4 intramolecular transferase & original description: none


Gene families : OG0003044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43618

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00258450 evm_27.TU.AmTr_v1... Coenzyme metabolism.phylloquinone... 0.02 OrthoFinder output from all 47 species
AT1G68890 No alias magnesium ion binding;thiamin pyrophosphate... 0.03 OrthoFinder output from all 47 species
Adi_g117118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29563 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0232.g059302 No alias multifunctional protein *(PHYLLO) involved in... 0.03 OrthoFinder output from all 47 species
Ceric.1Z241600.1 Ceric.1Z241600 multifunctional protein *(PHYLLO) involved in... 0.03 OrthoFinder output from all 47 species
Ehy_g29851 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20660.1 No alias isochorismate synthase. multifunctional phylloquinone... 0.03 OrthoFinder output from all 47 species
Nbi_g29600 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24515 No alias EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g071030.3.1 ICS2, ATICS2,... isochorismate synthase. isochorismate synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030976 thiamine pyrophosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 1719 2038
IPR015890 Chorismate_C 360 608
IPR032264 MenD_middle 855 1043
IPR029065 Enolase_C-like 1432 1612
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 633 794
No external refs found!