1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g30871

Ore_g30871 (HCF101)


Aliases : HCF101

Description : scaffold protein HCF101 of plastidial SUF system transfer phase & original description: none


Gene families : OG0004803 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004803_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g30871

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00060790 HCF101,... Coenzyme metabolism.iron-sulfur cluster assembly... 0.04 OrthoFinder output from all 47 species
AT3G24430 HCF101 ATP binding 0.05 OrthoFinder output from all 47 species
Adi_g075712 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.08 OrthoFinder output from all 47 species
Aev_g11015 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.06 OrthoFinder output from all 47 species
Ala_g13945 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Als_g18429 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Aob_g14161 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Aop_g25561 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Aspi01Gene57116.t1 HCF101, Aspi01Gene57116 protein involved in PS-I assembly *(HCF101) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024765 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Cre01.g045902 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Dac_g13357 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Dcu_g01706 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Ehy_g06869 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.05 OrthoFinder output from all 47 species
GSVIVT01015424001 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.07 OrthoFinder output from all 47 species
Gb_01824 HCF101 Fe-S cluster assembly factor HCF101, chloroplastic... 0.04 OrthoFinder output from all 47 species
Gb_01825 HCF101 Fe-S cluster assembly factor HCF101, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_01826 HCF101 HCF101 protein involved in PS-I assembly 0.04 OrthoFinder output from all 47 species
LOC_Os01g52170.1 HCF101, LOC_Os01g52170 HCF101 protein involved in PS-I assembly. scaffold... 0.09 OrthoFinder output from all 47 species
Len_g45512 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Lfl_g12880 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Mp3g25470.1 HCF101 HCF101 protein involved in PS-I assembly. scaffold... 0.06 OrthoFinder output from all 47 species
Nbi_g10499 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Pir_g01014 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.02 OrthoFinder output from all 47 species
Ppi_g57975 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.04 OrthoFinder output from all 47 species
Sam_g25149 No alias scaffold protein HCF101 of plastidial SUF system... 0.03 OrthoFinder output from all 47 species
Smo91144 HCF101 Coenzyme metabolism.iron-sulfur cluster assembly... 0.03 OrthoFinder output from all 47 species
Solyc12g007010.2.1 HCF101, Solyc12g007010 HCF101 protein involved in PS-I assembly. scaffold... 0.05 OrthoFinder output from all 47 species
Spa_g12261 HCF101 scaffold protein HCF101 of plastidial SUF system... 0.06 OrthoFinder output from all 47 species
Zm00001e008773_P004 HCF101, Zm00001e008773 HCF101 protein involved in PS-I assembly. scaffold... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR033756 YlxH/NBP35 174 411
IPR002744 MIP18-like 80 153
No external refs found!