Description : not classified & original description: none
Gene families : OG0004721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004721_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g30043 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G02060 | No alias | DEAD/DEAH box helicase, putative | 0.02 | OrthoFinder output from all 47 species | |
Aev_g07951 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g17279 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g22379 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0257.g060601 | No alias | not classified & original description: CDS=200-3178 | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g04126 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g32880.1 | LOC_Os11g32880 | ATP-dependent DNA helicase At3g02060, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
Len_g28141 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05693 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10297916g0010 | No alias | ATP-dependent DNA helicase At3g02060, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g10930 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g42734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g094590.3.1 | Solyc02g094590 | ATP-dependent DNA helicase At3g02060, chloroplastic... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006281 | DNA repair | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006298 | mismatch repair | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |