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  5. Ore_g28770

Ore_g28770 (PSRP5)


Aliases : PSRP5

Description : component *(cL37) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0007652 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007652_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g28770

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00213540 PSRP5,... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT3G56910 PSRP5 plastid-specific 50S ribosomal protein 5 0.07 OrthoFinder output from all 47 species
Aev_g35452 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Ala_g20889 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Als_g21728 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g03750 No alias component *(cL37) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dac_g01920 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g12621 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dde_g23334 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ehy_g01939 No alias component *(cL37) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01025849001 PSRP5 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
LOC_Os01g17150.1 PSRP5, LOC_Os01g17150 component psPSRP5 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Len_g02486 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g10082 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_317435g0010 PSRP5 component psPSRP5 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp6g16600.1 PSRP5 component psPSRP5 of large ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Msp_g01322 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Nbi_g17871 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pnu_g08742 No alias component *(cL37) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007874 No alias component *(cL37) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Sam_g06595 No alias component *(cL37) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Solyc10g081100.3.1 PSRP5, Solyc10g081100 component psPSRP5 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Spa_g46739 PSRP5 component *(cL37) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e017391_P001 PSRP5, Zm00001e017391 component psPSRP5 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Zm00001e025476_P001 PSRP5, Zm00001e025476 component psPSRP5 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!