Aliases : RAD23-3, RAD23C
Description : ubiquitin-proteasome shuttle factor *(RAD23) & original description: none
Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g123403 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g38438 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g24550 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g10404 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0179.g056277 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g67782 | RAD23A | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g06924 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g05747 | RAD23A | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g08300.1 | RAD23B, RAD23,... | shuttle protein (RAD23) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g04293 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g08671 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g41307 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g08630 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g31543 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g11616 | RAD23-3, RAD23C | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26899 | No alias | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Smo77427 | RAD23B, RAD23 | Ubiquitin receptor RAD23b OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Smo82644 | RAD23B, RAD23 | Ubiquitin receptor RAD23b OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g007120.4.1 | RAD23-3, RAD23C,... | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06239 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEA | Interproscan |
BP | GO:0006289 | nucleotide-excision repair | IEA | Interproscan |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
CC | GO:0044599 | AP-5 adaptor complex | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
No external refs found! |