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  5. Ore_g19286

Ore_g19286


Description : not classified & original description: none


Gene families : OG0002655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002655_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g19286
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT2G15560 No alias Putative endonuclease or glycosyl hydrolase 0.02 OrthoFinder output from all 47 species
Aob_g33990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031726001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os08g13390.1 LOC_Os08g13390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g18060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015797 No alias not classified & original description: CDS=1-3090 0.04 OrthoFinder output from all 47 species
Sam_g14347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039783_P001 Zm00001e039783 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025605 OST-HTH/LOTUS_dom 280 341
IPR025605 OST-HTH/LOTUS_dom 450 512
IPR021139 NYN_MARF1 33 175
No external refs found!