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  5. Ore_g10809

Ore_g10809 (SPA4)


Aliases : SPA4

Description : regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & original description: none


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10809
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00097p00139510 SPA2,... External stimuli response.light.red/far red... 0.02 OrthoFinder output from all 47 species
Aev_g20316 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Ala_g07511 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.04 OrthoFinder output from all 47 species
Ala_g09701 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Als_g24085 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Aop_g39226 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Azfi_s0560.g076943 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Cba_g04733 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Cba_g15102 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Ceric.22G021600.1 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.07 OrthoFinder output from all 47 species
Dac_g20526 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.05 OrthoFinder output from all 47 species
Dac_g44670 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Dde_g01612 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
GSVIVT01007271001 FUS1, EMB168,... External stimuli response.light.red/far red... 0.05 OrthoFinder output from all 47 species
GSVIVT01020559001 SPA3 Protein modification.phosphorylation.PEK kinase 0.02 OrthoFinder output from all 47 species
LOC_Os02g53140.1 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.03 OrthoFinder output from all 47 species
LOC_Os05g49590.1 SPA1, LOC_Os05g49590 protein kinase (PEK). regulator component SPA of... 0.01 OrthoFinder output from all 47 species
Len_g02398 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Len_g13907 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.05 OrthoFinder output from all 47 species
Lfl_g12926 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.05 OrthoFinder output from all 47 species
MA_423393g0010 SPA3 protein kinase (PEK). regulator component SPA of... 0.02 OrthoFinder output from all 47 species
Msp_g14662 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Msp_g18911 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.04 OrthoFinder output from all 47 species
Nbi_g06333 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Nbi_g11726 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.03 OrthoFinder output from all 47 species
Pir_g05451 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.06 OrthoFinder output from all 47 species
Pir_g15161 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Pnu_g07513 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Ppi_g03935 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Ppi_g49237 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Sam_g08955 No alias component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Solyc11g011980.3.1 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.01 OrthoFinder output from all 47 species
Tin_g09992 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Tin_g19820 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.06 OrthoFinder output from all 47 species
Zm00001e015983_P001 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.03 OrthoFinder output from all 47 species
Zm00001e019928_P005 SPA4, Zm00001e019928 protein kinase (PEK). regulator component SPA of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 884 912
IPR001680 WD40_repeat 918 954
IPR001680 WD40_repeat 837 870
No external refs found!