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  5. Ore_g08778

Ore_g08778 (EMB86, EMB1030, EMB263)


Aliases : EMB86, EMB1030, EMB263

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none


Gene families : OG0001528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g08778

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00214450 EMB86, EMB1030,... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
AT5G22800 EMB86, EMB1030, EMB263 Alanyl-tRNA synthetase, class IIc 0.12 OrthoFinder output from all 47 species
Aev_g15227 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.08 OrthoFinder output from all 47 species
Ala_g13265 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.07 OrthoFinder output from all 47 species
Als_g05106 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g06066 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Aop_g08353 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0114.g046026 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Cba_g14026 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Cba_g30396 ACD, ALATS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G012400.1 EMB86, EMB1030,... EC_6.1 ligase forming carbon-oxygen bond & original... 0.07 OrthoFinder output from all 47 species
Cre08.g368900 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Dac_g09278 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Dde_g11577 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g20259 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01023918001 EMB86, EMB1030, EMB263 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.08 OrthoFinder output from all 47 species
Gb_36215 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.07 OrthoFinder output from all 47 species
LOC_Os06g13660.1 EMB86, EMB1030,... alanine-tRNA ligase 0.09 OrthoFinder output from all 47 species
Len_g17359 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Lfl_g12875 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.1 OrthoFinder output from all 47 species
MA_10282308g0010 EMB86, EMB1030, EMB263 alanine-tRNA ligase 0.03 OrthoFinder output from all 47 species
Msp_g25185 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Nbi_g21729 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.08 OrthoFinder output from all 47 species
Pir_g64933 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Pnu_g26458 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.06 OrthoFinder output from all 47 species
Ppi_g56809 EMB86, EMB1030, EMB263 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63150 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g26484 No alias EC_6.1 ligase forming carbon-oxygen bond & original... 0.05 OrthoFinder output from all 47 species
Solyc01g111990.3.1 EMB86, EMB1030,... alanine-tRNA ligase 0.08 OrthoFinder output from all 47 species
Spa_g39932 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.04 OrthoFinder output from all 47 species
Tin_g43549 EMB86, EMB1030, EMB263 EC_6.1 ligase forming carbon-oxygen bond & original... 0.03 OrthoFinder output from all 47 species
Zm00001e036036_P002 EMB86, EMB1030,... alanine-tRNA ligase 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 776 819
IPR018164 Ala-tRNA-synth_IIc_N 111 677
IPR003156 DHHA1_dom 857 997
No external refs found!