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  5. Ore_g07897

Ore_g07897


Description : not classified & original description: none


Gene families : OG0002419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g07897
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Adi_g010693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.19G079300.1 Ceric.19G079300 not classified & original description: pacid=50575149... 0.04 OrthoFinder output from all 47 species
Ehy_g31336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016078001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g54990.2 LOC_Os02g54990 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g01245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_330807g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g10724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018369 No alias not classified & original description: CDS=53-1303 0.02 OrthoFinder output from all 47 species
Sam_g14452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 5 409
No external refs found!