Ppi_g56587 (EMB2247)

Aliases : EMB2247

Description : EC_6.1 ligase forming carbon-oxygen bond & original description: none

Gene families : OG0001685 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001685_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ppi_g56587
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00143390	EMB2247,...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
AMTR_s00038p00088230	VALRS, TWN2,...	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
AT5G16715	EMB2247	ATP binding;valine-tRNA ligases;aminoacyl-tRNA...	0.08	OrthoFinder output from all 47 species
Adi_g054739	VALRS, TWN2	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Aev_g05503	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Ala_g39122	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Als_g16555	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Aop_g21612	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene49069.t1	EMB2247, Aspi01Gene49069	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene49161.t1	EMB2247, Aspi01Gene49161	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000362	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Cba_g18347	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Ceric.08G062000.1	EMB2247, Ceric.08G062000	EC_6.1 ligase forming carbon-oxygen bond & original...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000402.37	EMB2247	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
Cre07.g350500	EMB2247	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.04	OrthoFinder output from all 47 species
Dac_g01768	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Dde_g24253	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Ehy_g01640	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01030775001	EMB2247	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	OrthoFinder output from all 47 species
GSVIVT01030776001	EMB2247	Valine--tRNA ligase, chloroplastic/mitochondrial 2...	0.02	OrthoFinder output from all 47 species
Gb_39267	EMB2247	valine-tRNA ligase	0.05	OrthoFinder output from all 47 species
LOC_Os07g06940.1	EMB2247, LOC_Os07g06940	valine-tRNA ligase	0.03	OrthoFinder output from all 47 species
Len_g18059	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.05	OrthoFinder output from all 47 species
Lfl_g08398	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.08	OrthoFinder output from all 47 species
MA_374514g0010	EMB2247	Valine--tRNA ligase, chloroplastic/mitochondrial 2...	0.02	OrthoFinder output from all 47 species
Mp2g20730.1	EMB2247	valine-tRNA ligase	0.04	OrthoFinder output from all 47 species
Nbi_g13320	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Pir_g04280	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.06	OrthoFinder output from all 47 species
Pnu_g06459	VALRS, TWN2	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Pnu_g33324	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004650	VALRS, TWN2	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014522	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.03	OrthoFinder output from all 47 species
Sam_g09052	No alias	EC_6.1 ligase forming carbon-oxygen bond & original...	0.04	OrthoFinder output from all 47 species
Solyc12g019100.2.1	EMB2247, Solyc12g019100	Valine--tRNA ligase, chloroplastic/mitochondrial 2...	0.06	OrthoFinder output from all 47 species
Solyc12g019110.3.1	EMB2247, Solyc12g019110	valine-tRNA ligase	0.04	OrthoFinder output from all 47 species
Spa_g22308	EMB2247	EC_6.1 ligase forming carbon-oxygen bond & original...	0.07	OrthoFinder output from all 47 species
Zm00001e011483_P001	EMB2247, Zm00001e011483	valine-tRNA ligase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004820	glycine-tRNA ligase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002300	aa-tRNA-synth_Ia	80	637
IPR019499	Val-tRNA_synth_tRNA-bd	898	960
IPR013155	M/V/L/I-tRNA-synth_anticd-bd	689	835

External Links

No external refs found!

Ppi_g56587 (EMB2247)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation