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  5. Ppi_g28537

Ppi_g28537 (ADF7)


Aliases : ADF7

Description : actin-depolymerizing factor & original description: none


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g28537
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
Aob_g10080 ADF10 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22708 ADF8 actin-depolymerizing factor & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g40769 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02796 ADF6, ATADF6 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
MA_76641g0010 ADF5, ATADF5 actin-depolymerizing factor 0.03 OrthoFinder output from all 47 species
Mp2g12970.1 ADF8 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Nbi_g21315 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37309 ADF7 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g26617 ADF8 actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22380 No alias actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g084660.2.1 ATADF4, ADF4,... actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species
Zm00001e002133_P002 ADF6, ATADF6,... actin-depolymerizing factor 0.01 OrthoFinder output from all 47 species
Zm00001e034985_P001 ADF11, Zm00001e034985 actin-depolymerizing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
CC GO:0000124 SAGA complex IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 11 126
No external refs found!