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  5. Ppi_g17898

Ppi_g17898


Description : not classified & original description: none


Gene families : OG0003094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g17898

Target Alias Description ECC score Gene Family Method Actions
Adi_g056661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g39970.1 LOC_Os02g39970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g06192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g117420.4.1 Solyc03g117420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g007400.3.1 Solyc07g007400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g007420.3.1 Solyc07g007420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g00746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015100_P001 Zm00001e015100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 299 358
IPR001611 Leu-rich_rpt 225 246
IPR001611 Leu-rich_rpt 441 457
IPR001611 Leu-rich_rpt 371 387
IPR001611 Leu-rich_rpt 202 224
No external refs found!