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  5. Ppi_g02197

Ppi_g02197


Description : not classified & original description: none


Gene families : OG0008872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008872_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g02197
Cluster HCCA: Cluster_222

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene42446.t1 Aspi01Gene42446 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42446.t2 Aspi01Gene42446 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42446.t3 Aspi01Gene42446 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13816 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g27161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016732 No alias not classified & original description: CDS=1-1821 0.02 OrthoFinder output from all 47 species
Sam_g50715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 170 227
IPR001611 Leu-rich_rpt 58 110
No external refs found!