Heatmap: Cluster_222 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Sterile Frond	Fertile Frond	Young Stem with Root	Mature Stem with Root	Root
Ppi_g00090	1.12	0.66	-0.76	-0.84	-3.34
Ppi_g00123 (PGR5)	1.32	0.84	-1.45	-2.14	-3.08
Ppi_g00704	0.57	0.45	-0.5	-0.26	-0.72
Ppi_g00925	0.7	0.45	-0.38	-0.5	-0.9
Ppi_g00978	1.47	0.79	-2.02	-2.42	-3.94
Ppi_g01483	0.95	0.52	-0.41	-0.84	-1.64
Ppi_g01739	0.79	0.57	-0.46	-0.4	-1.74
Ppi_g01758	0.6	0.42	-0.29	-0.44	-0.77
Ppi_g01910	1.18	0.73	-0.77	-1.66	-2.51
Ppi_g02195	0.84	0.51	-0.7	-0.53	-1.07
Ppi_g02197	0.85	0.62	-0.74	-0.51	-1.48
Ppi_g02261 (ERS)	0.66	0.36	-0.25	-0.24	-1.15
Ppi_g02694	0.9	0.54	-0.63	-0.18	-2.7
Ppi_g02717	0.75	0.56	-0.48	-0.2	-1.98
Ppi_g02720	1.12	0.62	-1.16	-0.88	-1.75
Ppi_g02799	0.82	0.69	-0.48	-1.16	-1.12
Ppi_g03209 (SBE2.2)	0.81	0.43	-0.26	-0.41	-1.68
Ppi_g03239 (PUB44)	0.73	0.33	-0.62	-0.33	-0.65
Ppi_g03607	1.27	0.82	-1.56	-1.75	-2.4
Ppi_g04076	0.83	0.61	-0.48	-0.73	-1.41
Ppi_g04159	0.56	0.21	-0.05	-0.26	-0.8
Ppi_g04297	1.1	0.65	-0.99	-1.11	-1.62
Ppi_g04362 (EMB2001)	0.64	0.46	-0.3	-0.46	-0.92
Ppi_g04379	0.9	0.48	-0.47	-0.33	-2.19
Ppi_g04549	1.07	0.57	-0.75	-0.84	-1.89
Ppi_g05207 (COI1)	1.03	0.44	-0.88	-0.85	-0.98
Ppi_g05279 (LSF1)	1.0	0.59	-0.53	-0.99	-1.75
Ppi_g06001	0.71	0.44	-0.5	-0.38	-0.92
Ppi_g06180	0.92	0.46	-0.48	-0.46	-1.77
Ppi_g06328	0.71	0.54	-0.33	-0.39	-1.52
Ppi_g06946 (SPT)	0.84	0.59	-0.62	-0.39	-1.78
Ppi_g07133	0.93	0.5	-0.67	-0.4	-1.79
Ppi_g07184	1.38	0.89	-1.7	-2.02	-
Ppi_g07240	1.4	1.11	-3.33	-3.42	-
Ppi_g07342	0.74	0.46	-0.55	-0.49	-0.83
Ppi_g08087	0.98	0.66	-0.33	-1.3	-2.06
Ppi_g08422 (PIRL4)	0.75	0.33	-0.58	-0.24	-0.87
Ppi_g08939	0.66	0.62	-0.4	-0.47	-1.31
Ppi_g09138	0.6	0.47	-0.51	-0.27	-0.83
Ppi_g09346 (GWD)	0.95	0.45	-0.78	-0.46	-1.34
Ppi_g10105	0.79	0.45	-0.05	-0.3	-3.0
Ppi_g10300	0.83	0.59	-0.6	-0.84	-1.01
Ppi_g10566 (CHLI2)	1.04	0.51	-0.51	-0.83	-2.0
Ppi_g10917 (DUF3)	0.67	0.51	-0.17	-0.61	-1.18
Ppi_g11527	0.81	0.37	-0.67	-0.46	-0.73
Ppi_g11535 (ATPPR5)	0.62	0.31	-0.23	-0.29	-0.86
Ppi_g11585 (emb2726)	1.01	0.63	-0.67	-0.84	-2.0
Ppi_g12111	0.82	0.5	-0.56	-0.46	-1.25
Ppi_g12183 (TROL)	0.71	0.46	-0.69	-0.33	-0.82
Ppi_g12616	0.72	0.44	-0.54	-0.41	-0.83
Ppi_g12641 (OK1)	1.1	0.58	-1.11	-0.82	-1.6
Ppi_g12716	0.86	0.59	-0.73	-0.38	-1.71
Ppi_g13174	1.38	0.75	-1.71	-1.27	-
Ppi_g13456	0.31	0.14	-0.05	-0.16	-0.33
Ppi_g13592	0.89	0.58	-0.57	-0.52	-1.82
Ppi_g14241 (ALA1)	1.07	0.68	-1.26	-1.1	-1.25
Ppi_g14613	0.88	0.59	-0.7	-0.26	-2.3
Ppi_g15429 (emb1688)	0.55	0.4	-0.37	-0.16	-0.85
Ppi_g15490	0.71	0.39	-0.3	-0.35	-1.13
Ppi_g15946	0.67	0.42	-0.3	-0.65	-0.69
Ppi_g16378 (CP31)	0.74	0.63	-0.43	-0.72	-1.2
Ppi_g16493 (CDF3)	0.98	0.63	-0.97	-0.31	-2.57
Ppi_g16633	0.89	0.62	-0.52	-0.86	-1.46
Ppi_g16746	0.95	0.45	-0.78	-0.34	-1.57
Ppi_g17095	1.23	0.92	-1.24	-1.65	-6.14
Ppi_g18449	1.35	0.86	-1.69	-1.74	-4.81
Ppi_g21618 (MSRB2)	0.83	0.49	-0.38	-0.83	-1.06
Ppi_g22067	0.77	0.64	-0.67	-0.58	-1.18
Ppi_g22188	1.01	0.5	-0.93	-0.41	-1.76
Ppi_g23891	0.65	0.44	-0.47	-0.33	-0.84
Ppi_g23973 (CSD1)	0.66	0.48	-0.15	-0.55	-1.2
Ppi_g24544	0.88	0.6	-0.52	-0.3	-2.9
Ppi_g26269 (TT7)	1.14	0.79	-0.8	-1.06	-5.82
Ppi_g27251	1.29	0.87	-2.43	-0.92	-6.51
Ppi_g27940	0.88	0.69	-0.54	-1.05	-1.41
Ppi_g29310 (PIP)	0.67	0.61	-0.23	-0.64	-1.35
Ppi_g29430	0.98	0.48	-0.64	-0.55	-1.69
Ppi_g29472	0.97	0.58	-1.01	-0.3	-2.08
Ppi_g30079 (CCB1)	0.75	0.76	-0.37	-0.78	-1.9
Ppi_g30472	0.62	0.39	-0.27	-0.49	-0.7
Ppi_g30936 (CR88)	0.77	0.58	-0.44	-0.47	-1.54
Ppi_g31058	1.26	0.76	-1.76	-0.71	-7.63
Ppi_g31059	1.19	0.87	-1.89	-0.75	-5.61
Ppi_g31288	1.06	0.63	-0.64	-0.72	-3.01
Ppi_g31289	0.96	0.58	-0.38	-0.62	-2.81
Ppi_g31522	0.99	0.41	-0.58	-0.39	-1.96
Ppi_g31617	1.0	0.56	-0.77	-0.64	-1.77
Ppi_g31664	1.02	0.67	-0.95	-0.42	-3.04
Ppi_g31967 (RPL27)	0.96	0.62	-0.41	-0.82	-2.29
Ppi_g32647	0.6	0.38	-0.34	-0.27	-0.82
Ppi_g32971	0.82	0.42	-0.25	-0.7	-1.19
Ppi_g33059 (OE23)	1.07	0.67	-0.4	-1.02	-4.16
Ppi_g33578	1.07	0.56	-0.1	-1.44	-2.95
Ppi_g35699	0.58	0.48	-0.44	-0.24	-0.91
Ppi_g35775	1.09	0.57	-0.61	-1.07	-1.97
Ppi_g38143	1.45	1.05	-2.88	-4.13	-7.11
Ppi_g38876 (CP31)	0.73	0.54	-0.74	-0.43	-0.9
Ppi_g39074	0.76	0.51	-0.42	-0.59	-1.06
Ppi_g40012	0.78	0.47	-0.82	-0.43	-0.76
Ppi_g40603	0.92	0.59	-0.92	-0.9	-0.9
Ppi_g41643	0.92	0.58	-0.58	-0.73	-1.54
Ppi_g42183 (LHCB2)	1.27	0.89	-1.02	-2.23	-5.05
Ppi_g43473 (SS3)	1.18	0.59	-0.78	-0.86	-3.42
Ppi_g44345	0.7	0.49	-0.49	-0.08	-1.69
Ppi_g45361 (Phox2)	0.96	0.64	-0.88	-0.54	-1.9
Ppi_g46355	0.9	0.6	-0.27	-0.59	-2.95
Ppi_g46522 (RFC3)	0.8	0.49	-0.66	-0.5	-0.97
Ppi_g46587	0.91	0.53	-0.49	-0.99	-1.11
Ppi_g52663	0.95	0.64	-0.95	-0.47	-1.92
Ppi_g53494 (UGT74E2)	1.5	0.98	-3.34	-3.2	-
Ppi_g54343 (HB5)	1.01	0.65	-0.77	-0.36	-4.43
Ppi_g54535	1.13	0.76	-1.25	-1.42	-1.61
Ppi_g55166	1.5	0.89	-2.36	-3.15	-7.68
Ppi_g55758 (ECT5)	0.77	0.31	-0.45	-0.24	-1.07
Ppi_g55924	1.19	0.54	-1.32	-1.15	-1.28
Ppi_g56556 (TRANS11)	0.49	0.31	-0.31	-0.18	-0.59
Ppi_g57314	1.2	0.81	-2.75	-0.53	-3.32
Ppi_g58181 (AAE1)	0.86	0.45	-0.67	-0.5	-1.04
Ppi_g59302 (CRR22)	0.78	0.44	-0.36	-0.44	-1.28
Ppi_g59311	0.91	0.48	-0.6	-0.4	-1.66
Ppi_g59328	0.95	0.38	-0.54	-0.48	-1.47
Ppi_g60121	0.89	0.44	-0.58	-0.67	-1.03
Ppi_g60559	0.79	0.34	-0.3	-0.35	-1.31
Ppi_g61336	1.32	0.35	-1.19	-1.08	-1.63
Ppi_g63170	1.43	1.17	-5.62	-5.34	-
Ppi_g63817 (emb1513)	0.73	0.52	-0.58	-0.4	-1.05

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.