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  5. Ppi_g01128

Ppi_g01128


Description : proline-tRNA ligase & original description: none


Gene families : OG0001971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001971_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ppi_g01128

Target Alias Description ECC score Gene Family Method Actions
Aev_g05302 No alias proline-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001576.14 OVA6, PRORS1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder output from all 47 species
Cre10.g429100 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 OrthoFinder output from all 47 species
Dcu_g02781 No alias proline-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00716 No alias proline-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g25470.1 No alias proline-tRNA ligase 0.03 OrthoFinder output from all 47 species
Solyc06g068320.3.1 Solyc06g068320 proline-tRNA ligase 0.02 OrthoFinder output from all 47 species
Tin_g15505 No alias proline-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007170_P001 Zm00001e007170 proline-tRNA ligase 0.05 OrthoFinder output from all 47 species
Zm00001e024670_P003 Zm00001e024670 proline-tRNA ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR016061 Pro-tRNA_ligase_II_C 428 501
IPR002314 aa-tRNA-synt_IIb 120 286
IPR004154 Anticodon-bd 305 398
No external refs found!