Aliases : emb2458, evm_27.TU.AmTr_v1.0_scaffold00110.130
Description : Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana
Gene families : OG0007060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007060_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AMTR_s00110p00154620 | |
Cluster | HCCA: Cluster_101 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G04340 | emb2458 | FtsH extracellular protease family | 0.04 | OrthoFinder output from all 47 species | |
Aob_g10860 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene59749.t1 | Aspi01Gene59749 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0154.g053499 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.26G060900.1 | emb2458, Ceric.26G060900 | component *(FtsHi) of protein translocation ATPase motor... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g02047 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01021791001 | emb2458 | Probable inactive ATP-dependent zinc metalloprotease... | 0.03 | OrthoFinder output from all 47 species | |
Gb_28496 | emb2458 | Probable inactive ATP-dependent zinc metalloprotease... | 0.03 | OrthoFinder output from all 47 species | |
Len_g01924 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g22625 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.03 | OrthoFinder output from all 47 species | |
MA_10435946g0010 | emb2458 | Probable inactive ATP-dependent zinc metalloprotease... | 0.02 | OrthoFinder output from all 47 species | |
MA_9758g0010 | emb2458 | Probable inactive ATP-dependent zinc metalloprotease... | 0.03 | OrthoFinder output from all 47 species | |
Mp6g10290.1 | emb2458 | Probable inactive ATP-dependent zinc metalloprotease... | 0.06 | OrthoFinder output from all 47 species | |
Ore_g16438 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03996 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0225.g026312 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14588 | No alias | component *(FtsHi) of protein translocation ATPase motor... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g032960.2.1 | emb2458, Solyc02g032960 | Probable inactive ATP-dependent zinc metalloprotease... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05748 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g07565 | emb2458 | component *(FtsHi) of protein translocation ATPase motor... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004222 | metalloendopeptidase activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006508 | proteolysis | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
MF | GO:0003950 | NAD+ ADP-ribosyltransferase activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
CC | GO:0005694 | chromosome | IEP | HCCA |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006471 | obsolete protein ADP-ribosylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
MF | GO:2001070 | starch binding | IEP | HCCA |
No external refs found! |