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  5. AMTR_s00102p00032910

AMTR_s00102p00032910 (ATLDA, ATPU1, LDA,...)


Aliases : ATLDA, ATPU1, LDA, PU1, evm_27.TU.AmTr_v1.0_scaffold00102.10

Description : Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.pullulanase-type enzyme


Gene families : OG0004422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00102p00032910

Target Alias Description ECC score Gene Family Method Actions
Ppi_g31091 ATLDA, ATPU1, LDA, PU1 starch-debranching pullulan-6-glucanohydrolase *(PU1) &... 0.03 OrthoFinder output from all 47 species

Type
  • GO Term
    		•  Name Evidence Source
    MF GO:0003824 catalytic activity IEA Interproscan
    MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
    BP GO:0005975 carbohydrate metabolic process IEA Interproscan
    MF GO:0043169 cation binding IEA Interproscan
    Toggle parental
    Type GO Term Name Evidence Source
    MF GO:0003896 DNA primase activity IEP HCCA
    MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
    MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
    MF GO:0004386 helicase activity IEP HCCA
    MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
    CC GO:0005737 cytoplasm IEP HCCA
    BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
    BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
    BP GO:0006399 tRNA metabolic process IEP HCCA
    BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
    BP GO:0006520 amino acid metabolic process IEP HCCA
    BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
    CC GO:0008303 caspase complex IEP HCCA
    BP GO:0016070 RNA metabolic process IEP HCCA
    MF GO:0016763 pentosyltransferase activity IEP HCCA
    MF GO:0016779 nucleotidyltransferase activity IEP HCCA
    MF GO:0016874 ligase activity IEP HCCA
    MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
    MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
    MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
    BP GO:0032774 RNA biosynthetic process IEP HCCA
    MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
    BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
    BP GO:0034660 ncRNA metabolic process IEP HCCA
    CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
    BP GO:0043038 amino acid activation IEP HCCA
    BP GO:0043039 tRNA aminoacylation IEP HCCA
    BP GO:0046483 heterocycle metabolic process IEP HCCA
    BP GO:0090304 nucleic acid metabolic process IEP HCCA
    MF GO:0097747 RNA polymerase activity IEP HCCA
    CC GO:0098796 membrane protein complex IEP HCCA
    MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
    MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
    CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
    MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
    BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
    CC GO:1905368 peptidase complex IEP HCCA
    CC GO:1905369 endopeptidase complex IEP HCCA
    InterPro domains Description Start Stop
    IPR006047 Glyco_hydro_13_cat_dom 446 579
    IPR024561 Pullul_strch_C 777 948
    IPR004193 Glyco_hydro_13_N 193 278
    No external refs found!