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  5. AMTR_s00053p00152680

AMTR_s00053p00152680 (V157, PDE166, ALB1,...)


Aliases : V157, PDE166, ALB1, CHLD, ALB-1V, evm_27.TU.AmTr_v1.0_scaffold00053.100

Description : Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component


Gene families : OG0005530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00053p00152680
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G08520 V157, PDE166,... ALBINA 1 0.15 OrthoFinder output from all 47 species
Adi_g106636 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Aev_g43655 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Ala_g02354 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030898 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Cba_g04049 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Ceric.13G055900.1 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001537.12 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Cre05.g242000 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.05 OrthoFinder output from all 47 species
Dcu_g03080 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11037 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01002904001 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Gb_04254 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.06 OrthoFinder output from all 47 species
LOC_Os03g59640.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.08 OrthoFinder output from all 47 species
Len_g12127 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.08 OrthoFinder output from all 47 species
Lfl_g04202 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.08 OrthoFinder output from all 47 species
MA_10428524g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
MA_173818g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic... 0.05 OrthoFinder output from all 47 species
Mp6g04260.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.07 OrthoFinder output from all 47 species
Msp_g10513 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.06 OrthoFinder output from all 47 species
Nbi_g13327 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g05358 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Pnu_g08517 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.08 OrthoFinder output from all 47 species
Ppi_g56909 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Smo174616 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.09 OrthoFinder output from all 47 species
Solyc04g015490.4.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.06 OrthoFinder output from all 47 species
Zm00001e011796_P001 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016987 sigma factor activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!